The 2.0 version of rSNPBase

Variant report

Variant rs34391279
Chromosome Location chr1:150281795-150281796
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150267000-150284000 Weak transcription Brain Substantia Nigra brain
2 chr1:150267000-150293200 Weak transcription Stomach Mucosa stomach
3 chr1:150267200-150286400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
4 chr1:150267800-150282000 Strong transcription Fetal Muscle Trunk muscle
5 chr1:150268000-150282600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
6 chr1:150268000-150293200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
7 chr1:150268200-150282600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
8 chr1:150268200-150282600 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr1:150268200-150282800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
10 chr1:150268200-150282800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
11 chr1:150268200-150282800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
12 chr1:150269000-150282800 Strong transcription Fetal Thymus thymus
13 chr1:150269400-150282800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr1:150271600-150284000 Weak transcription Colonic Mucosa Colon
15 chr1:150272600-150282800 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
16 chr1:150274000-150282800 Strong transcription Fetal Brain Female brain
17 chr1:150274800-150282800 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
18 chr1:150274800-150284600 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr1:150275000-150286400 Weak transcription HepG2 liver
20 chr1:150275200-150282800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr1:150275400-150282600 Weak transcription Right Ventricle heart
22 chr1:150275400-150283400 Weak transcription Aorta Aorta
23 chr1:150275600-150282200 Weak transcription Fetal Heart heart
24 chr1:150275600-150282800 Strong transcription Fetal Adrenal Gland Adrenal Gland
25 chr1:150275600-150286400 Weak transcription Psoas Muscle Psoas
26 chr1:150276000-150293200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr1:150276000-150293200 Weak transcription Dnd41 blood
28 chr1:150276200-150282800 Strong transcription iPS-20b Cell Line embryonic stem cell
29 chr1:150276400-150282600 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr1:150276400-150284200 Weak transcription NH-A brain
31 chr1:150276400-150284800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
32 chr1:150276400-150293200 Weak transcription Primary T killer naive cells fromperipheralblood blood
33 chr1:150276400-150293200 Weak transcription Fetal Kidney kidney
34 chr1:150276600-150282800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
35 chr1:150276600-150282800 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
36 chr1:150277200-150282000 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
37 chr1:150277400-150282600 Strong transcription HUES48 Cell Line embryonic stem cell
38 chr1:150277800-150282800 Strong transcription Stomach Smooth Muscle stomach
39 chr1:150278000-150283600 Weak transcription Fetal Lung lung
40 chr1:150278200-150283600 Weak transcription Brain Cingulate Gyrus brain
41 chr1:150278800-150284200 Weak transcription ES-I3 Cell Line embryonic stem cell
42 chr1:150278800-150293400 Weak transcription NHDF-Ad bronchial
43 chr1:150279200-150282800 Strong transcription Fetal Intestine Large intestine
44 chr1:150279400-150282400 Strong transcription Primary T helper cells PMA-I stimulated --
45 chr1:150279600-150282800 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr1:150279800-150282000 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr1:150279800-150282600 Strong transcription Brain Anterior Caudate brain
48 chr1:150279800-150282800 Strong transcription Primary B cells from peripheral blood blood
49 chr1:150279800-150282800 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
50 chr1:150279800-150282800 Strong transcription A549 lung

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Last update: Aug 31, 2015