The 2.0 version of rSNPBase

Variant report

Variant rs7417465
Chromosome Location chr1:150440598-150440599
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150373200-150442800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:150383400-150443200 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr1:150401400-150448200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:150411200-150446400 Strong transcription Dnd41 blood
5 chr1:150412000-150443000 Weak transcription iPS-15b Cell Line embryonic stem cell
6 chr1:150413600-150446200 Strong transcription Primary Natural Killer cells fromperipheralblood blood
7 chr1:150413600-150446400 Strong transcription Primary B cells from peripheral blood blood
8 chr1:150413800-150446000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:150414000-150446400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:150414200-150440800 Strong transcription Fetal Intestine Large intestine
11 chr1:150414400-150442200 Weak transcription Fetal Heart heart
12 chr1:150419200-150441000 Weak transcription HMEC breast
13 chr1:150419200-150442200 Weak transcription NH-A brain
14 chr1:150419200-150443200 Weak transcription Psoas Muscle Psoas
15 chr1:150422800-150446400 Strong transcription Fetal Stomach stomach
16 chr1:150423800-150447200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr1:150424800-150446600 Strong transcription HUES64 Cell Line embryonic stem cell
18 chr1:150425200-150446200 Strong transcription Fetal Muscle Trunk muscle
19 chr1:150425800-150445600 Strong transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:150425800-150445800 Strong transcription Fetal Muscle Leg muscle
21 chr1:150425800-150447000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
22 chr1:150426800-150446400 Strong transcription Fetal Intestine Small intestine
23 chr1:150428400-150443200 Weak transcription Small Intestine intestine
24 chr1:150428600-150446400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr1:150429000-150442600 Weak transcription Stomach Mucosa stomach
26 chr1:150429600-150447000 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr1:150429800-150440600 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
28 chr1:150430000-150442600 Weak transcription Colonic Mucosa Colon
29 chr1:150430400-150443000 Weak transcription NHLF lung
30 chr1:150430600-150442200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr1:150431000-150443000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr1:150431400-150442800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
33 chr1:150431400-150443000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
34 chr1:150432200-150443200 Weak transcription Esophagus oesophagus
35 chr1:150432600-150443200 Weak transcription Fetal Brain Male brain
36 chr1:150432800-150441400 Weak transcription NHEK skin
37 chr1:150432800-150442200 Weak transcription Brain Hippocampus Middle brain
38 chr1:150432800-150442200 Weak transcription HSMMtube muscle
39 chr1:150432800-150442600 Weak transcription Muscle Satellite Cultured Cells --
40 chr1:150432800-150442800 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
41 chr1:150432800-150443200 Weak transcription HUVEC blood vessel
42 chr1:150433000-150443200 Weak transcription Osteobl bone
43 chr1:150433200-150443200 Weak transcription Right Ventricle heart
44 chr1:150433400-150443000 Weak transcription Rectal Smooth Muscle rectum
45 chr1:150433800-150446400 Strong transcription Sigmoid Colon Sigmoid Colon
46 chr1:150434200-150444200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
47 chr1:150434800-150443000 Weak transcription Spleen Spleen
48 chr1:150435200-150446600 Strong transcription Primary T cells fromperipheralblood blood
49 chr1:150435200-150447200 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr1:150435400-150440600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived

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Last update: Aug 31, 2015