Variant report

Variant rs7550234
Chromosome Location chr1:150544768-150544769
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150534400-150547200 Weak transcription Ovary ovary
2 chr1:150540600-150544800 Enhancers Psoas Muscle Psoas
3 chr1:150540800-150545600 Enhancers Right Atrium heart
4 chr1:150540800-150545600 Enhancers Right Ventricle heart
5 chr1:150541400-150545400 Weak transcription H9 Cell Line embryonic stem cell
6 chr1:150541400-150545600 Genic enhancers Rectal Mucosa Donor 31 rectum
7 chr1:150541400-150545800 Weak transcription Pancreatic Islets Pancreatic Islet
8 chr1:150541400-150547200 Genic enhancers Fetal Intestine Small intestine
9 chr1:150541400-150549200 Weak transcription ES-WA7 Cell Line embryonic stem cell
10 chr1:150541600-150545200 Weak transcription Fetal Kidney kidney
11 chr1:150541600-150545600 Weak transcription Brain Angular Gyrus brain
12 chr1:150541800-150546800 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
13 chr1:150542000-150545400 Genic enhancers Primary B cells from peripheral blood blood
14 chr1:150542000-150545600 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
15 chr1:150542000-150545600 Strong transcription Fetal Brain Female brain
16 chr1:150542000-150547200 Genic enhancers Primary monocytes fromperipheralblood blood
17 chr1:150542200-150545200 Genic enhancers Primary T helper cells fromperipheralblood blood
18 chr1:150542200-150545600 Genic enhancers Rectal Mucosa Donor 29 rectum
19 chr1:150542200-150547200 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr1:150542200-150547200 Strong transcription Brain Germinal Matrix brain
21 chr1:150542200-150548000 Genic enhancers Placenta Placenta
22 chr1:150542400-150544800 Enhancers Skeletal Muscle Female skeletal muscle
23 chr1:150542400-150545600 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr1:150542400-150546800 Genic enhancers Fetal Muscle Leg muscle
25 chr1:150542400-150547000 Strong transcription Fetal Adrenal Gland Adrenal Gland
26 chr1:150542600-150545000 Genic enhancers Sigmoid Colon Sigmoid Colon
27 chr1:150542600-150545200 Genic enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:150542600-150545400 Weak transcription Brain Substantia Nigra brain
29 chr1:150542600-150545600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:150542600-150545600 Genic enhancers Adipose Nuclei Adipose
31 chr1:150542600-150545600 Genic enhancers Liver Liver
32 chr1:150542600-150545600 Weak transcription Brain Cingulate Gyrus brain
33 chr1:150542600-150547200 Genic enhancers Lung lung
34 chr1:150542600-150548200 Genic enhancers Cortex derived primary cultured neurospheres brain
35 chr1:150542800-150545200 Weak transcription Hela-S3 cervix
36 chr1:150542800-150545200 Weak transcription HepG2 liver
37 chr1:150542800-150545200 Weak transcription K562 blood
38 chr1:150542800-150545400 Strong transcription HUES48 Cell Line embryonic stem cell
39 chr1:150542800-150545400 Genic enhancers Muscle Satellite Cultured Cells --
40 chr1:150542800-150545600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
41 chr1:150542800-150545800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
42 chr1:150542800-150547800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr1:150542800-150551600 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
44 chr1:150543000-150545000 Weak transcription Primary hematopoietic stem cells blood
45 chr1:150543000-150545200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:150543000-150546000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
47 chr1:150543000-150549200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
48 chr1:150543200-150545000 Weak transcription A549 lung
49 chr1:150543200-150545200 Weak transcription ES-I3 Cell Line embryonic stem cell
50 chr1:150543200-150545200 Weak transcription iPS-18 Cell Line embryonic stem cell

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