The 2.0 version of rSNPBase

Variant report

Variant rs72700822
Chromosome Location chr1:150524878-150524879
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:150521600-150525600 Bivalent Enhancer Primary T cells fromperipheralblood blood
2 chr1:150521600-150532600 Weak transcription Brain Angular Gyrus brain
3 chr1:150522000-150526400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
4 chr1:150522200-150525200 Flanking Active TSS Adipose Nuclei Adipose
5 chr1:150522200-150525400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
6 chr1:150522400-150525400 Enhancers Primary T helper cells fromperipheralblood blood
7 chr1:150522400-150526000 Enhancers Brain Hippocampus Middle brain
8 chr1:150522400-150526000 Enhancers Lung lung
9 chr1:150522400-150532800 Weak transcription Cortex derived primary cultured neurospheres brain
10 chr1:150522600-150525400 Enhancers Primary T helper naive cells fromperipheralblood blood
11 chr1:150522600-150525800 Enhancers A549 lung
12 chr1:150522600-150526000 Enhancers Placenta Amnion Placenta Amnion
13 chr1:150522600-150526200 Enhancers Primary hematopoietic stem cells blood
14 chr1:150522600-150530200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
15 chr1:150522600-150531200 Weak transcription Brain Substantia Nigra brain
16 chr1:150522600-150532200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:150522800-150525000 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr1:150522800-150525000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
19 chr1:150522800-150525600 Enhancers Fetal Muscle Trunk muscle
20 chr1:150522800-150526000 Enhancers Fetal Lung lung
21 chr1:150522800-150526200 Enhancers Primary B cells from cord blood blood
22 chr1:150522800-150526200 Enhancers Liver Liver
23 chr1:150522800-150526400 Enhancers Primary Natural Killer cells fromperipheralblood blood
24 chr1:150522800-150526600 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
25 chr1:150522800-150527200 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
26 chr1:150522800-150527400 Enhancers Breast Myoepithelial Primary Cells Breast
27 chr1:150522800-150528000 Weak transcription Aorta Aorta
28 chr1:150522800-150532200 Weak transcription Sigmoid Colon Sigmoid Colon
29 chr1:150523000-150525600 Transcr. at gene 5' and 3' K562 blood
30 chr1:150523000-150525800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
31 chr1:150523000-150526400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:150523200-150525200 Bivalent Enhancer Fetal Thymus thymus
33 chr1:150523200-150525400 Enhancers Primary T helper cells PMA-I stimulated --
34 chr1:150523200-150526000 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
35 chr1:150523200-150526000 Flanking Active TSS Primary neutrophils fromperipheralblood blood
36 chr1:150523200-150526000 Enhancers NHDF-Ad bronchial
37 chr1:150523200-150526000 Enhancers NHLF lung
38 chr1:150523200-150526200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr1:150523200-150528000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
40 chr1:150523400-150525200 Enhancers Primary T killer naive cells fromperipheralblood blood
41 chr1:150523400-150525400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
42 chr1:150523400-150525600 Enhancers ES-I3 Cell Line embryonic stem cell
43 chr1:150523400-150525600 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr1:150523400-150525600 Enhancers Fetal Stomach stomach
45 chr1:150523400-150525600 Enhancers Left Ventricle heart
46 chr1:150523400-150525800 Enhancers Right Ventricle heart
47 chr1:150523400-150525800 Enhancers HSMMtube muscle
48 chr1:150523400-150526000 Enhancers Fetal Adrenal Gland Adrenal Gland
49 chr1:150523400-150526200 Enhancers Skeletal Muscle Female skeletal muscle
50 chr1:150523600-150525200 Enhancers Skeletal Muscle Male skeletal muscle

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015