Variant report

Variant	rs669696
Chromosome Location	chr16:69626136-69626137
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr16:69622847..69627243-chr16:69629072..69632922,5	K562	blood:
2	chr16:69626084..69628621-chr16:69630498..69632392,2	MCF-7	breast:
3	chr16:69601805..69603372-chr16:69624249..69627246,2	K562	blood:
4	chr16:69624364..69627243-chr16:69629072..69631620,3	K562	blood:
5	chr16:69620967..69623720-chr16:69625732..69628226,3	K562	blood:

Extended variants
information (count: 35 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:35)

rs_ID	r²[population]
rs11075729	0.86[AFR][1000 genomes]
rs11640319	0.86[AFR][1000 genomes]
rs12599391	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12923231	0.85[EUR][1000 genomes]
rs12929503	0.87[EUR][1000 genomes]
rs12933292	0.87[EUR][1000 genomes]
rs1364063	0.86[AFR][1000 genomes];0.91[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1437134	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.86[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2032912	0.86[EUR][1000 genomes]
rs2161630	0.86[AFR][1000 genomes]
rs244415	0.87[AFR][1000 genomes];0.90[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs244418	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs244420	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2917677	0.80[AFR][1000 genomes];0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs35967356	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs3848278	0.86[AFR][1000 genomes]
rs4633710	0.86[AFR][1000 genomes]
rs4783721	0.85[EUR][1000 genomes]
rs4783722	0.86[AMR][1000 genomes];0.89[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs62052815	0.82[EUR][1000 genomes]
rs62052816	0.87[EUR][1000 genomes]
rs6499240	0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6499244	0.83[AMR][1000 genomes];0.88[ASN][1000 genomes]
rs7187634	0.81[AFR][1000 genomes]
rs7191292	0.84[AFR][1000 genomes]
rs7205551	0.86[AFR][1000 genomes]
rs73568391	0.81[AFR][1000 genomes]
rs7359336	0.82[AFR][1000 genomes];0.86[AMR][1000 genomes];0.87[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs8049728	0.84[AFR][1000 genomes]
rs8055756	0.86[AFR][1000 genomes]
rs8061052	0.83[AFR][1000 genomes]
rs862320	0.97[AFR][1000 genomes];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs889398	0.83[EUR][1000 genomes]
rs889399	0.83[EUR][1000 genomes]
rs9938213	0.86[AFR][1000 genomes]

No data

Chromatin state (count:94 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr16:69602000-69633000	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
2	chr16:69602200-69627000	Weak transcription	Primary T cells fromperipheralblood	blood
3	chr16:69602200-69628600	Weak transcription	Right Atrium	heart
4	chr16:69602200-69631600	Weak transcription	Pancreas	Pancrea
5	chr16:69602200-69643200	Weak transcription	Fetal Muscle Leg	muscle
6	chr16:69602200-69646600	Weak transcription	Primary hematopoietic stem cells	blood
7	chr16:69602200-69653600	Weak transcription	Fetal Thymus	thymus
8	chr16:69602600-69628600	Weak transcription	Thymus	Thymus
9	chr16:69602600-69628800	Weak transcription	Right Ventricle	heart
10	chr16:69602600-69629600	Weak transcription	HSMMtube	muscle
11	chr16:69602600-69630200	Weak transcription	Sigmoid Colon	Sigmoid Colon
12	chr16:69602600-69630800	Weak transcription	Rectal Mucosa Donor 31	rectum
13	chr16:69602800-69627800	Weak transcription	Fetal Kidney	kidney
14	chr16:69602800-69629200	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
15	chr16:69603000-69627800	Weak transcription	Brain Substantia Nigra	brain
16	chr16:69603000-69647400	Weak transcription	Stomach Smooth Muscle	stomach
17	chr16:69603200-69627800	Weak transcription	Primary B cells from cord blood	blood
18	chr16:69603200-69629600	Weak transcription	NH-A	brain
19	chr16:69603600-69627000	Weak transcription	HUES64 Cell Line	embryonic stem cell
20	chr16:69603600-69629200	Weak transcription	HUVEC	blood vessel
21	chr16:69603600-69660000	Weak transcription	Primary B cells from peripheral blood	blood
22	chr16:69604000-69627800	Weak transcription	Fetal Lung	lung
23	chr16:69604000-69628000	Weak transcription	Primary T cells from cord blood	blood
24	chr16:69604000-69629000	Weak transcription	NHLF	lung
25	chr16:69605400-69629200	Weak transcription	HUES48 Cell Line	embryonic stem cell
26	chr16:69605400-69663200	Weak transcription	Fetal Muscle Trunk	muscle
27	chr16:69605600-69660600	Weak transcription	Primary Natural Killer cells fromperipheralblood	blood
28	chr16:69609600-69627400	Weak transcription	Fetal Intestine Large	intestine
29	chr16:69610600-69629200	Weak transcription	Aorta	Aorta
30	chr16:69610800-69628600	Weak transcription	Left Ventricle	heart
31	chr16:69610800-69630800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
32	chr16:69610800-69642000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr16:69611000-69628000	Weak transcription	Brain Angular Gyrus	brain
34	chr16:69611000-69628800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
35	chr16:69611000-69629200	Weak transcription	HMEC	breast
36	chr16:69611200-69627800	Weak transcription	Primary T regulatory cells fromperipheralblood	blood
37	chr16:69611200-69645600	Weak transcription	Primary T helper cells fromperipheralblood	blood
38	chr16:69611600-69628000	Weak transcription	Skeletal Muscle Female	skeletal muscle
39	chr16:69611600-69628400	Weak transcription	NHDF-Ad	bronchial
40	chr16:69611600-69629000	Weak transcription	Brain Hippocampus Middle	brain
41	chr16:69611800-69626400	Weak transcription	Osteobl	bone
42	chr16:69611800-69628800	Weak transcription	Placenta Amnion	Placenta Amnion
43	chr16:69611800-69629200	Weak transcription	Primary T helper naive cells from peripheral blood	blood
44	chr16:69612400-69627400	Weak transcription	Liver	Liver
45	chr16:69612400-69643800	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
46	chr16:69612600-69628000	Weak transcription	Brain Cingulate Gyrus	brain
47	chr16:69612600-69629000	Weak transcription	NHEK	skin
48	chr16:69613200-69627200	Weak transcription	Small Intestine	intestine
49	chr16:69614000-69643200	Weak transcription	Colon Smooth Muscle	Colon
50	chr16:69614000-69644400	Weak transcription	Adipose Nuclei	Adipose

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