The 2.0 version of rSNPBase

Variant report

Variant rs6698329
Chromosome Location chr1:183967788-183967789
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:34 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:183955000-183971200 Weak transcription Right Atrium heart
2 chr1:183958600-183974200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr1:183958800-183971000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:183961400-183970800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
5 chr1:183963000-183969400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:183965200-183967800 Enhancers Cortex derived primary cultured neurospheres brain
7 chr1:183965800-183971200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
8 chr1:183965800-183971200 Weak transcription Left Ventricle heart
9 chr1:183966000-183971000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
10 chr1:183966000-183971000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
11 chr1:183966000-183971000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
12 chr1:183966000-183971000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
13 chr1:183966000-183971200 Weak transcription H1 Cell Line embryonic stem cell
14 chr1:183966000-183971200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr1:183966000-183971200 Weak transcription Colon Smooth Muscle Colon
16 chr1:183966000-183972400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
17 chr1:183966200-183968400 Enhancers K562 blood
18 chr1:183966200-183970800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
19 chr1:183966200-183970800 Weak transcription Brain Cingulate Gyrus brain
20 chr1:183966200-183971000 Weak transcription HUES64 Cell Line embryonic stem cell
21 chr1:183966200-183971000 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:183966200-183971000 Weak transcription Stomach Mucosa stomach
23 chr1:183966200-183971200 Weak transcription ES-I3 Cell Line embryonic stem cell
24 chr1:183966200-183971200 Weak transcription HUES6 Cell Line embryonic stem cell
25 chr1:183966200-183971200 Weak transcription iPS-20b Cell Line embryonic stem cell
26 chr1:183966400-183971200 Weak transcription HUES48 Cell Line embryonic stem cell
27 chr1:183967200-183970600 Weak transcription Brain Substantia Nigra brain
28 chr1:183967400-183970800 Weak transcription HepG2 liver
29 chr1:183967400-183971000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:183967600-183967800 Enhancers Brain Angular Gyrus brain
31 chr1:183967600-183970800 Weak transcription Brain Hippocampus Middle brain
32 chr1:183967600-183971000 Weak transcription HMEC breast
33 chr1:183967600-183971200 Weak transcription Fetal Heart heart
34 chr1:183967600-183971200 Weak transcription NHEK skin

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Last update: Aug 31, 2015