Variant report

Variant rs6702465
Chromosome Location chr1:78476743-78476744
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:101 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:78448800-78488200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
2 chr1:78452800-78478800 Weak transcription Spleen Spleen
3 chr1:78454200-78485600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:78469600-78476800 Active TSS HSMMtube muscle
5 chr1:78469600-78477200 Active TSS Aorta Aorta
6 chr1:78469800-78476800 Active TSS Stomach Smooth Muscle stomach
7 chr1:78469800-78477400 Active TSS Right Ventricle heart
8 chr1:78470800-78487800 Weak transcription ES-WA7 Cell Line embryonic stem cell
9 chr1:78471000-78487400 Weak transcription Lung lung
10 chr1:78471200-78486400 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr1:78471600-78483000 Weak transcription Placenta Amnion Placenta Amnion
12 chr1:78471600-78483400 Weak transcription iPS-18 Cell Line embryonic stem cell
13 chr1:78471600-78483800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
14 chr1:78471600-78487000 Weak transcription Primary B cells from peripheral blood blood
15 chr1:78471800-78477200 Transcr. at gene 5' and 3' HSMM muscle
16 chr1:78471800-78482000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:78472000-78478800 Weak transcription Monocytes-CD14+_RO01746 blood
18 chr1:78472000-78479200 Weak transcription Fetal Brain Male brain
19 chr1:78472000-78484800 Weak transcription Colonic Mucosa Colon
20 chr1:78472000-78487000 Weak transcription Primary monocytes fromperipheralblood blood
21 chr1:78472200-78484200 Weak transcription HUES64 Cell Line embryonic stem cell
22 chr1:78472400-78483200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr1:78472400-78486800 Weak transcription Fetal Thymus thymus
24 chr1:78472600-78476800 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr1:78472600-78478600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr1:78472600-78478800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr1:78472600-78479800 Weak transcription Fetal Stomach stomach
28 chr1:78472800-78477000 Enhancers HepG2 liver
29 chr1:78472800-78478600 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr1:78472800-78478600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:78472800-78478800 Weak transcription Placenta Placenta
32 chr1:78472800-78481600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:78472800-78482000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr1:78472800-78486400 Weak transcription Primary hematopoietic stem cells blood
35 chr1:78473800-78477000 Active TSS GM12878-XiMat blood
36 chr1:78473800-78480200 Weak transcription Primary T cells fromperipheralblood blood
37 chr1:78473800-78487000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
38 chr1:78474000-78478600 Weak transcription Fetal Muscle Trunk muscle
39 chr1:78474000-78480600 Weak transcription Rectal Mucosa Donor 31 rectum
40 chr1:78474000-78483200 Weak transcription Primary T regulatory cells fromperipheralblood blood
41 chr1:78474000-78486800 Weak transcription Primary T helper naive cells fromperipheralblood blood
42 chr1:78474000-78486800 Weak transcription Pancreas Pancrea
43 chr1:78474200-78477200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
44 chr1:78474200-78478600 Weak transcription Duodenum Mucosa Duodenum
45 chr1:78474200-78478800 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr1:78474200-78480000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr1:78474200-78480600 Weak transcription Fetal Lung lung
48 chr1:78474200-78482600 Weak transcription NHEK skin
49 chr1:78474200-78483600 Weak transcription HMEC breast
50 chr1:78474200-78484800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin

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