Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:212263390..212265128-chr2:212269573..212272489,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10048757	0.90[ASN][1000 genomes]
rs11895168	0.89[ASN][1000 genomes]
rs12475523	0.89[ASN][1000 genomes]
rs13014117	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13025037	0.89[ASN][1000 genomes]
rs1583483	0.82[ASN][1000 genomes]
rs1595062	0.90[ASN][1000 genomes]
rs1595065	0.89[ASN][1000 genomes]
rs1816533	0.90[ASN][1000 genomes]
rs1821656	0.86[AFR][1000 genomes];0.89[ASN][1000 genomes]
rs1836724	0.89[ASN][1000 genomes]
rs1972820	0.89[ASN][1000 genomes]
rs3791689	0.83[EUR][1000 genomes]
rs3791692	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3828243	0.83[ASN][1000 genomes]
rs4672612	0.88[ASN][1000 genomes]
rs4673610	0.85[ASN][1000 genomes]
rs4673615	0.84[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6710253	0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs934607	0.82[EUR][1000 genomes];0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:5 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv834523	chr2:212163236-212331393	Weak transcription Enhancers Flanking Active TSS Bivalent Enhancer Strong transcription Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1 gene(s)	inside rSNPs	diseases
2	nsv875776	chr2:212196908-212264818	Enhancers Weak transcription Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer Active TSS	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
3	nsv584314	chr2:212238982-212292521	Weak transcription Flanking Active TSS Enhancers Active TSS Strong transcription ZNF genes & repeats Genic enhancers	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
4	nsv460065	chr2:212244520-212276710	Strong transcription Enhancers Weak transcription Active TSS Flanking Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases
5	nsv584315	chr2:212244520-212276710	Enhancers Strong transcription Weak transcription Flanking Active TSS Active TSS Genic enhancers ZNF genes & repeats	Chromatin interactive region miRNA target site	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:212258600-212272200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr2:212261800-212268600	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:212262800-212264400	Weak transcription	Pancreatic Islets	Pancreatic Islet

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