Variant report

Variant	rs6737803
Chromosome Location	chr2:141604941-141604942
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10170474	0.81[CEU][hapmap];0.82[EUR][1000 genomes]
rs10191493	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs10496859	0.84[CEU][hapmap]
rs11893327	0.82[CEU][hapmap]
rs12469393	0.84[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs1366802	0.84[CEU][hapmap];0.83[EUR][1000 genomes]
rs1469481	0.81[CEU][hapmap];0.82[EUR][1000 genomes]
rs2380943	0.89[CEU][hapmap]
rs4426471	0.90[AMR][1000 genomes];0.87[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv583198	chr2:141510791-142150620	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv1003008	chr2:141518795-141763505	Weak transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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