Variant report

Variant rs6739240
Chromosome Location chr2:30978800-30978801
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:30960400-30980000 Weak transcription Brain Hippocampus Middle brain
2 chr2:30965800-30999400 Weak transcription Pancreatic Islets Pancreatic Islet
3 chr2:30967400-30978800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
4 chr2:30968200-30985600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr2:30970600-30978800 Weak transcription Duodenum Mucosa Duodenum
6 chr2:30971000-30984800 Weak transcription Stomach Mucosa stomach
7 chr2:30974400-30978800 Weak transcription Rectal Mucosa Donor 31 rectum
8 chr2:30976400-30978800 Weak transcription Fetal Intestine Small intestine
9 chr2:30977800-30979200 Weak transcription Gastric stomach
10 chr2:30978000-30980800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
11 chr2:30978200-30979000 Enhancers Spleen Spleen
12 chr2:30978200-30980000 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
13 chr2:30978200-30980200 Bivalent Enhancer Foreskin Keratinocyte Primary Cells skin02 Skin
14 chr2:30978400-30979200 Enhancers Lung lung
15 chr2:30978400-30979400 Enhancers Breast Myoepithelial Primary Cells Breast
16 chr2:30978400-30979600 Bivalent Enhancer Fetal Adrenal Gland Adrenal Gland
17 chr2:30978400-30980800 Enhancers Pancreas Pancrea
18 chr2:30978400-30981200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr2:30978600-30978800 Enhancers Fetal Kidney kidney
20 chr2:30978600-30979200 Enhancers HUES48 Cell Line embryonic stem cell
21 chr2:30978600-30979400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr2:30978600-30979600 Enhancers HUES6 Cell Line embryonic stem cell
23 chr2:30978600-30979600 Enhancers HMEC breast
24 chr2:30978600-30979800 Enhancers NHEK skin
25 chr2:30978600-30984600 Weak transcription Rectal Mucosa Donor 29 rectum
26 chr2:30978800-30979000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
27 chr2:30978800-30979000 Enhancers Fetal Intestine Small intestine
28 chr2:30978800-30979200 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
29 chr2:30978800-30979200 Enhancers Adipose Nuclei Adipose
30 chr2:30978800-30979200 Enhancers Placenta Amnion Placenta Amnion
31 chr2:30978800-30979400 Enhancers Fetal Lung lung
32 chr2:30978800-30979600 Enhancers Duodenum Mucosa Duodenum
33 chr2:30978800-30979600 Enhancers Esophagus oesophagus
34 chr2:30978800-30979600 Enhancers Fetal Intestine Large intestine
35 chr2:30978800-30979600 Enhancers Placenta Placenta
36 chr2:30978800-30979600 Enhancers K562 blood
37 chr2:30978800-30979800 Enhancers ES-I3 Cell Line embryonic stem cell
38 chr2:30978800-30979800 Enhancers Small Intestine intestine
39 chr2:30978800-30980200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr2:30978800-30980200 Bivalent Enhancer Skeletal Muscle Male skeletal muscle
41 chr2:30978800-30980600 Enhancers Fetal Muscle Leg muscle
42 chr2:30978800-30980600 Strong transcription Rectal Mucosa Donor 31 rectum

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