Variant report

Variant	rs6742182
Chromosome Location	chr2:185535621-185535622
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10931149	0.89[EUR][1000 genomes]
rs12469299	0.81[CEU][hapmap];0.92[EUR][1000 genomes]
rs17617356	0.81[CEU][hapmap]
rs17617408	0.81[CEU][hapmap];0.92[EUR][1000 genomes]
rs17617468	0.92[EUR][1000 genomes]
rs17617913	0.89[CEU][hapmap];0.84[JPT][hapmap]
rs2035320	0.91[CEU][hapmap]
rs2369593	0.90[CEU][hapmap];0.96[EUR][1000 genomes]
rs35230759	0.92[EUR][1000 genomes]
rs6434092	0.91[CEU][hapmap];0.96[EUR][1000 genomes]
rs6728764	0.82[YRI][hapmap]
rs7581009	0.91[CEU][hapmap];0.96[EUR][1000 genomes]
rs899845	0.96[EUR][1000 genomes]
rs899846	0.90[CEU][hapmap];0.91[EUR][1000 genomes]
rs994653	0.81[CEU][hapmap];0.92[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv532412	chr2:185347334-186108701	ZNF genes & repeats Enhancers Flanking Active TSS Weak transcription Flanking Bivalent TSS/Enh Active TSS Bivalent/Poised TSS Bivalent Enhancer Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	23 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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