Variant report

Variant rs6778652
Chromosome Location chr3:195147883-195147884
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:195094800-195161200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr3:195095200-195161800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:195127000-195149800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
4 chr3:195131800-195154800 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr3:195131800-195160600 Weak transcription Hela-S3 cervix
6 chr3:195132000-195148000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr3:195132000-195161200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
8 chr3:195133800-195161000 Weak transcription NHDF-Ad bronchial
9 chr3:195138600-195157200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
10 chr3:195143600-195149200 Weak transcription Aorta Aorta
11 chr3:195144400-195149800 Weak transcription Psoas Muscle Psoas
12 chr3:195144800-195161200 Weak transcription Sigmoid Colon Sigmoid Colon
13 chr3:195145000-195155000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
14 chr3:195145200-195148200 Enhancers Primary T helper cells PMA-I stimulated --
15 chr3:195145400-195154600 Weak transcription Primary T cells fromperipheralblood blood
16 chr3:195145600-195162400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
17 chr3:195146200-195148000 Enhancers Primary T helper cells fromperipheralblood blood
18 chr3:195146200-195148400 Enhancers Primary T helper naive cells fromperipheralblood blood
19 chr3:195146200-195148400 Enhancers Primary T killer naive cells fromperipheralblood blood
20 chr3:195146200-195148600 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr3:195146400-195148000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
22 chr3:195146400-195148400 Enhancers Primary T helper 17 cells PMA-I stimulated --
23 chr3:195146600-195148000 Enhancers Primary monocytes fromperipheralblood blood
24 chr3:195146600-195148000 Enhancers Thymus Thymus
25 chr3:195146600-195148200 Enhancers Ovary ovary
26 chr3:195146600-195148200 Enhancers Monocytes-CD14+_RO01746 blood
27 chr3:195146600-195148600 Enhancers K562 blood
28 chr3:195146800-195148000 Enhancers Pancreas Pancrea
29 chr3:195146800-195148000 Enhancers Spleen Spleen
30 chr3:195146800-195148200 Enhancers Primary B cells from peripheral blood blood
31 chr3:195147000-195148800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
32 chr3:195147000-195161000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
33 chr3:195147000-195162200 Weak transcription Esophagus oesophagus
34 chr3:195147200-195148200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
35 chr3:195147200-195149800 Weak transcription Right Atrium heart
36 chr3:195147200-195150200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr3:195147200-195153200 Weak transcription Primary T killer memory cells from peripheral blood blood
38 chr3:195147200-195161800 Weak transcription Fetal Thymus thymus
39 chr3:195147400-195148400 Weak transcription Primary T regulatory cells fromperipheralblood blood
40 chr3:195147400-195153000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr3:195147400-195153200 Weak transcription Primary T cells from cord blood blood
42 chr3:195147400-195153400 Weak transcription ES-I3 Cell Line embryonic stem cell
43 chr3:195147400-195154000 Weak transcription Primary hematopoietic stem cells blood
44 chr3:195147600-195148000 ZNF genes & repeats Fetal Intestine Small intestine
45 chr3:195147600-195154600 Weak transcription Primary hematopoietic stem cells short term culture blood
46 chr3:195147800-195148200 Strong transcription Primary B cells from cord blood blood
47 chr3:195147800-195148600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
48 chr3:195147800-195149800 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr3:195147800-195159000 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr3:195147800-195159200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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