Variant report

Variant	rs67866903
Chromosome Location	chr13:70080539-70080540
allele	-/A
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs1587697	0.85[ASN][1000 genomes]
rs164646	0.86[ASN][1000 genomes]
rs1831430	0.96[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2497359	0.86[ASN][1000 genomes]
rs352238	0.85[ASN][1000 genomes]
rs352239	0.85[ASN][1000 genomes]
rs352242	0.85[ASN][1000 genomes]
rs352245	0.85[ASN][1000 genomes]
rs352246	0.86[ASN][1000 genomes]
rs352247	0.86[ASN][1000 genomes]
rs352249	0.86[ASN][1000 genomes]
rs352251	0.86[ASN][1000 genomes]
rs4884853	0.89[AMR][1000 genomes];0.93[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs664401	0.86[ASN][1000 genomes]
rs681108	0.86[ASN][1000 genomes]
rs7317328	0.86[ASN][1000 genomes]
rs9572178	0.92[AFR][1000 genomes];0.96[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1045844	chr13:70038096-70405435	Active TSS Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	esv3400765	chr13:70051000-70083182	Enhancers Weak transcription ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:70072600-70082200	Weak transcription	Fetal Brain Male	brain

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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