Variant report

Variant	rs2497359
Chromosome Location	chr13:70027794-70027795
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 26 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs1249772	0.86[GIH][hapmap]
rs1587697	0.99[ASN][1000 genomes]
rs164646	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs1831430	0.86[ASN][1000 genomes]
rs2484137	0.87[ASN][1000 genomes]
rs2497360	0.87[ASN][1000 genomes]
rs2497362	0.87[ASN][1000 genomes]
rs2497365	0.86[CHB][hapmap]
rs2653915	0.93[ASN][1000 genomes]
rs2782484	0.84[ASN][1000 genomes]
rs352238	0.99[ASN][1000 genomes]
rs352239	0.99[ASN][1000 genomes]
rs352242	0.99[ASN][1000 genomes]
rs352245	0.91[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs352246	1.00[ASN][1000 genomes]
rs352247	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs352249	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs352251	1.00[ASN][1000 genomes]
rs4884853	0.80[ASN][1000 genomes]
rs664401	1.00[ASN][1000 genomes]
rs67866903	0.86[ASN][1000 genomes]
rs681108	1.00[ASN][1000 genomes]
rs7317328	1.00[ASN][1000 genomes]
rs949627	0.87[ASN][1000 genomes]
rs9572178	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900480	chr13:69891861-70027794	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:70024800-70032000	Weak transcription	Cortex derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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