Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs1587697	0.98[ASN][1000 genomes]
rs164646	0.99[ASN][1000 genomes]
rs1831430	0.85[ASN][1000 genomes]
rs2484137	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2497359	0.99[ASN][1000 genomes]
rs2497360	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2497362	0.81[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2497365	0.91[CHB][hapmap]
rs2653915	0.81[AFR][1000 genomes];0.92[ASN][1000 genomes]
rs2782484	0.85[ASN][1000 genomes]
rs352239	0.91[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs352242	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs352245	0.98[ASN][1000 genomes]
rs352246	0.88[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs352247	0.99[ASN][1000 genomes]
rs352249	0.99[ASN][1000 genomes]
rs352251	0.99[ASN][1000 genomes]
rs664401	0.90[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs67866903	0.85[ASN][1000 genomes]
rs681108	0.81[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs7317328	0.99[ASN][1000 genomes]
rs949627	0.81[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs9572178	0.87[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv900480	chr13:69891861-70027794	Enhancers Weak transcription ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv3445372	chr13:70020851-70025149	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr13:70024200-70024800	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr13:70024400-70024800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr13:70024400-70024800	Enhancers	Brain Germinal Matrix	brain

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