Variant report

Variant	rs6786904
Chromosome Location	chr3:155836414-155836415
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 39 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:38)

rs_ID	r²[population]
rs11915601	1.00[EUR][1000 genomes]
rs11927594	1.00[EUR][1000 genomes]
rs12163648	1.00[EUR][1000 genomes]
rs12330910	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13325529	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13327461	1.00[EUR][1000 genomes]
rs16825997	1.00[EUR][1000 genomes]
rs28368547	1.00[EUR][1000 genomes]
rs28555456	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4621291	1.00[EUR][1000 genomes]
rs59046488	1.00[EUR][1000 genomes]
rs6762067	1.00[EUR][1000 genomes]
rs6764802	1.00[EUR][1000 genomes]
rs6773597	1.00[EUR][1000 genomes]
rs6775388	0.82[YRI][hapmap];0.99[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6809595	1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs73014109	1.00[EUR][1000 genomes]
rs73014142	1.00[EUR][1000 genomes]
rs73014146	1.00[EUR][1000 genomes]
rs73014153	1.00[EUR][1000 genomes]
rs73014154	1.00[EUR][1000 genomes]
rs7625905	1.00[EUR][1000 genomes]
rs7626513	1.00[EUR][1000 genomes]
rs7637292	1.00[EUR][1000 genomes]
rs7639374	1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs7641812	1.00[EUR][1000 genomes]
rs7648151	1.00[EUR][1000 genomes]
rs924352	1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs9289963	1.00[EUR][1000 genomes]
rs9289964	1.00[EUR][1000 genomes]
rs9810962	1.00[EUR][1000 genomes]
rs9812993	1.00[EUR][1000 genomes]
rs9833026	1.00[EUR][1000 genomes]
rs9844565	1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs9858999	1.00[EUR][1000 genomes]
rs9866817	1.00[MEX][hapmap];1.00[EUR][1000 genomes]
rs9877749	1.00[EUR][1000 genomes]
rs9882449	0.93[ASW][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.93[MKK][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];0.87[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv592085	chr3:155827634-156012679	Enhancers Weak transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	8 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:155835200-155836600	Weak transcription	Pancreas	Pancrea

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