The 2.0 version of rSNPBase

Variant report

Variant rs67882627
Chromosome Location chr3:49380441-49380442
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:49378400-49382400 Enhancers Primary B cells from peripheral blood blood
2 chr3:49378600-49380600 Enhancers GM12878-XiMat blood
3 chr3:49378600-49380800 Enhancers Primary T helper naive cells fromperipheralblood blood
4 chr3:49378600-49381200 Weak transcription Right Atrium heart
5 chr3:49378600-49381400 Weak transcription Liver Liver
6 chr3:49378600-49382000 Enhancers Primary hematopoietic stem cells blood
7 chr3:49378600-49382000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
8 chr3:49378600-49382000 Weak transcription NHDF-Ad bronchial
9 chr3:49378600-49382400 Weak transcription Osteobl bone
10 chr3:49378600-49382600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
11 chr3:49378600-49382600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr3:49378600-49382600 Enhancers Primary hematopoietic stem cells short term culture blood
13 chr3:49378600-49382600 Weak transcription NH-A brain
14 chr3:49378600-49383800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
15 chr3:49378600-49383800 Weak transcription NHEK skin
16 chr3:49378600-49384000 Weak transcription NHLF lung
17 chr3:49378600-49384200 Weak transcription HSMMtube muscle
18 chr3:49378600-49384400 Weak transcription Psoas Muscle Psoas
19 chr3:49378600-49385200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr3:49378600-49386400 Weak transcription K562 blood
21 chr3:49378600-49386600 Weak transcription Stomach Mucosa stomach
22 chr3:49378600-49386800 Weak transcription Gastric stomach
23 chr3:49378600-49388400 Weak transcription Brain Hippocampus Middle brain
24 chr3:49378600-49388800 Weak transcription Brain Substantia Nigra brain
25 chr3:49378600-49388800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr3:49378600-49390000 Weak transcription Placenta Amnion Placenta Amnion
27 chr3:49378600-49392000 Enhancers Primary monocytes fromperipheralblood blood
28 chr3:49378800-49381200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr3:49378800-49381200 Weak transcription Muscle Satellite Cultured Cells --
30 chr3:49378800-49381200 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr3:49378800-49381200 Weak transcription HepG2 liver
32 chr3:49378800-49381400 Weak transcription Pancreas Pancrea
33 chr3:49378800-49381800 Weak transcription HUVEC blood vessel
34 chr3:49378800-49382000 Weak transcription Hela-S3 cervix
35 chr3:49378800-49382600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
36 chr3:49378800-49382600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
37 chr3:49378800-49382600 Weak transcription HMEC breast
38 chr3:49378800-49383400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr3:49378800-49383800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
40 chr3:49378800-49384000 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr3:49378800-49384200 Enhancers Adipose Nuclei Adipose
42 chr3:49378800-49386800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr3:49378800-49387400 Weak transcription Esophagus oesophagus
44 chr3:49379000-49381400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr3:49379000-49383800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
46 chr3:49379000-49384200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
47 chr3:49379000-49385800 Weak transcription Fetal Intestine Large intestine
48 chr3:49379000-49385800 Weak transcription Fetal Intestine Small intestine
49 chr3:49379000-49392000 Weak transcription Left Ventricle heart
50 chr3:49379200-49381600 Weak transcription Fetal Muscle Trunk muscle

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Last update: Aug 31, 2015