Variant report

Variant	rs67917249
Chromosome Location	chr4:20415808-20415809
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:36)

rs_ID	r²[population]
rs10006112	0.85[ASN][1000 genomes]
rs10938797	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11723573	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11931239	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.81[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12502618	0.85[ASN][1000 genomes]
rs12505297	0.83[ASN][1000 genomes]
rs12643858	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs13138008	0.88[ASN][1000 genomes]
rs13142826	0.91[AMR][1000 genomes];0.86[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13143964	0.82[AFR][1000 genomes];0.91[AMR][1000 genomes];0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs16869591	0.91[AMR][1000 genomes];0.89[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2031140	0.86[ASN][1000 genomes]
rs2031141	0.86[ASN][1000 genomes]
rs4132472	0.85[ASN][1000 genomes]
rs4235282	0.86[ASN][1000 genomes]
rs4280728	0.85[ASN][1000 genomes]
rs4318645	0.83[ASN][1000 genomes]
rs4328909	0.86[ASN][1000 genomes]
rs4490454	0.82[ASN][1000 genomes]
rs4696954	0.85[ASN][1000 genomes]
rs4696955	0.84[ASN][1000 genomes]
rs4696956	0.86[ASN][1000 genomes]
rs4697160	0.86[ASN][1000 genomes]
rs4697161	0.86[ASN][1000 genomes]
rs4697162	0.85[ASN][1000 genomes]
rs6447955	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs67927265	0.90[AFR][1000 genomes]
rs6821204	0.83[ASN][1000 genomes]
rs6853187	0.85[ASN][1000 genomes]
rs7440671	0.85[ASN][1000 genomes]
rs7663703	0.84[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs7683698	0.86[ASN][1000 genomes]
rs7687359	0.83[ASN][1000 genomes]
rs7687583	0.83[ASN][1000 genomes]
rs7692874	0.81[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs7694984	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv593795	chr4:20407591-20418308	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:20405200-20419600	Weak transcription	NHDF-Ad	bronchial
2	chr4:20406200-20420000	Weak transcription	Fetal Lung	lung
3	chr4:20410200-20420200	Weak transcription	NHLF	lung
4	chr4:20414400-20422400	Weak transcription	Fetal Stomach	stomach
5	chr4:20415800-20416400	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin

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