Variant report

Variant	rs6795746
Chromosome Location	chr3:134480681-134480682
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:5)

rs_ID	r²[population]
rs11915986	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11917704	0.86[AFR][1000 genomes]
rs11922047	1.00[YRI][hapmap]
rs6439518	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6784500	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv877515	chr3:134460368-134591138	Enhancers Bivalent Enhancer Weak transcription Bivalent/Poised TSS Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv518817	chr3:134478108-134486080	Enhancers Weak transcription	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:134479200-134481200	Enhancers	Breast Myoepithelial Primary Cells	Breast
2	chr3:134480000-134481400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
3	chr3:134480200-134481200	Enhancers	Psoas Muscle	Psoas
4	chr3:134480200-134481200	Enhancers	Skeletal Muscle Female	skeletal muscle
5	chr3:134480600-134481200	Weak transcription	Fetal Muscle Leg	muscle

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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