Variant report

Variant rs6803697
Chromosome Location chr3:56831548-56831549
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56807000-56833200 Weak transcription Placenta Amnion Placenta Amnion
2 chr3:56818600-56832000 Weak transcription Rectal Smooth Muscle rectum
3 chr3:56819200-56834400 Weak transcription Fetal Muscle Trunk muscle
4 chr3:56820600-56834600 Weak transcription NHDF-Ad bronchial
5 chr3:56822400-56833200 Weak transcription Fetal Stomach stomach
6 chr3:56822800-56833200 Weak transcription Duodenum Mucosa Duodenum
7 chr3:56823400-56833200 Weak transcription Fetal Muscle Leg muscle
8 chr3:56825000-56831800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr3:56825200-56832000 Weak transcription Brain Substantia Nigra brain
10 chr3:56825400-56831800 Weak transcription NHEK skin
11 chr3:56825600-56832400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
12 chr3:56826400-56833200 Weak transcription Stomach Smooth Muscle stomach
13 chr3:56826600-56831800 Weak transcription Psoas Muscle Psoas
14 chr3:56827400-56834400 Weak transcription Muscle Satellite Cultured Cells --
15 chr3:56828200-56832400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
16 chr3:56829000-56832000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:56829000-56832400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr3:56829000-56832400 Enhancers Colon Smooth Muscle Colon
19 chr3:56829000-56832400 Genic enhancers Fetal Thymus thymus
20 chr3:56829000-56832600 Enhancers HepG2 liver
21 chr3:56829000-56833200 Enhancers Fetal Adrenal Gland Adrenal Gland
22 chr3:56829000-56833200 Enhancers Stomach Mucosa stomach
23 chr3:56829200-56831600 Genic enhancers Primary T cells from cord blood blood
24 chr3:56829200-56831800 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
25 chr3:56829400-56832000 Enhancers Primary T helper naive cells fromperipheralblood blood
26 chr3:56829400-56832000 Enhancers Pancreatic Islets Pancreatic Islet
27 chr3:56829400-56832400 Weak transcription Duodenum Smooth Muscle Duodenum
28 chr3:56829400-56833000 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
29 chr3:56829400-56833200 Weak transcription Hela-S3 cervix
30 chr3:56829600-56833200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
31 chr3:56829600-56833200 Enhancers Fetal Brain Male brain
32 chr3:56829800-56832000 Enhancers Brain Hippocampus Middle brain
33 chr3:56830000-56832400 Genic enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
34 chr3:56830000-56832400 Weak transcription Primary B cells from cord blood blood
35 chr3:56830000-56833000 Enhancers Skeletal Muscle Female skeletal muscle
36 chr3:56830000-56833200 Weak transcription Esophagus oesophagus
37 chr3:56830200-56831600 Weak transcription Skeletal Muscle Male skeletal muscle
38 chr3:56830200-56832000 Transcr. at gene 5' and 3' Dnd41 blood
39 chr3:56830200-56832800 Enhancers Fetal Heart heart
40 chr3:56830200-56833200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
41 chr3:56830400-56831800 Flanking Active TSS Primary T cells fromperipheralblood blood
42 chr3:56830400-56832200 Weak transcription HUVEC blood vessel
43 chr3:56830600-56831600 Enhancers Gastric stomach
44 chr3:56830600-56832000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr3:56830600-56832200 Enhancers Thymus Thymus
46 chr3:56830600-56832400 Flanking Active TSS Primary T helper 17 cells PMA-I stimulated --
47 chr3:56830600-56833200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr3:56830600-56833200 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr3:56830600-56834200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
50 chr3:56830800-56832000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived

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