Variant report

Variant rs13434307
Chromosome Location chr3:56834289-56834290
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:105 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:56819200-56834400 Weak transcription Fetal Muscle Trunk muscle
2 chr3:56820600-56834600 Weak transcription NHDF-Ad bronchial
3 chr3:56827400-56834400 Weak transcription Muscle Satellite Cultured Cells --
4 chr3:56831600-56834400 Active TSS Fetal Kidney kidney
5 chr3:56832000-56835000 Flanking Active TSS Dnd41 blood
6 chr3:56832000-56835800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr3:56832200-56834400 Active TSS Brain Anterior Caudate brain
8 chr3:56832200-56834600 Flanking Active TSS Primary T cells from cord blood blood
9 chr3:56832200-56835400 Flanking Active TSS Primary T helper cells fromperipheralblood blood
10 chr3:56832200-56835400 Flanking Active TSS Monocytes-CD14+_RO01746 blood
11 chr3:56832400-56834400 Active TSS Primary T killer naive cells fromperipheralblood blood
12 chr3:56832400-56835000 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
13 chr3:56832400-56836200 Active TSS Breast Myoepithelial Primary Cells Breast
14 chr3:56832400-56836200 Active TSS Primary T cells fromperipheralblood blood
15 chr3:56832400-56836200 Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr3:56832400-56836600 Active TSS Pancreatic Islets Pancreatic Islet
17 chr3:56832600-56834600 Weak transcription Cortex derived primary cultured neurospheres brain
18 chr3:56832800-56834600 Active TSS Right Atrium heart
19 chr3:56832800-56836400 Active TSS Thymus Thymus
20 chr3:56832800-56836600 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr3:56833000-56834400 Enhancers Fetal Heart heart
22 chr3:56833000-56834600 Active TSS HepG2 liver
23 chr3:56833000-56835600 Flanking Active TSS HUVEC blood vessel
24 chr3:56833000-56836400 Active TSS Primary T helper cells PMA-I stimulated --
25 chr3:56833000-56836400 Active TSS HMEC breast
26 chr3:56833200-56834600 Enhancers Primary neutrophils fromperipheralblood blood
27 chr3:56833200-56834600 Enhancers Placenta Placenta
28 chr3:56833200-56834600 Active TSS Stomach Smooth Muscle stomach
29 chr3:56833200-56834800 Enhancers Fetal Lung lung
30 chr3:56833200-56835000 Flanking Active TSS Brain Inferior Temporal Lobe brain
31 chr3:56833200-56835400 Flanking Active TSS NHEK skin
32 chr3:56833200-56836000 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
33 chr3:56833400-56834400 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr3:56833400-56834400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
35 chr3:56833400-56834400 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr3:56833400-56834400 Weak transcription Esophagus oesophagus
37 chr3:56833400-56834400 Weak transcription Gastric stomach
38 chr3:56833400-56834400 Weak transcription Lung lung
39 chr3:56833400-56834400 Active TSS Psoas Muscle Psoas
40 chr3:56833400-56834600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:56833400-56834600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr3:56833400-56834600 Active TSS Pancreas Pancrea
43 chr3:56833400-56834600 Active TSS Right Ventricle heart
44 chr3:56833400-56834600 Weak transcription Spleen Spleen
45 chr3:56833400-56834800 Weak transcription Sigmoid Colon Sigmoid Colon
46 chr3:56833400-56834800 Weak transcription Small Intestine intestine
47 chr3:56833400-56835000 Active TSS Duodenum Mucosa Duodenum
48 chr3:56833400-56835400 Weak transcription Aorta Aorta
49 chr3:56833400-56836200 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
50 chr3:56833400-56836600 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast

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