Variant report

Variant	rs6826436
Chromosome Location	chr4:100604285-100604286
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs13120652	0.96[EUR][1000 genomes]
rs13120855	0.96[EUR][1000 genomes]
rs13135826	1.00[CEU][hapmap]
rs34098936	0.87[EUR][1000 genomes]
rs35661838	0.83[AFR][1000 genomes]
rs35826214	0.83[AFR][1000 genomes]
rs6532821	1.00[CEU][hapmap]
rs6815796	0.96[EUR][1000 genomes]
rs6821960	1.00[CEU][hapmap]
rs71614608	0.96[EUR][1000 genomes]
rs71614611	0.96[EUR][1000 genomes]
rs7665414	1.00[CEU][hapmap]
rs7667001	1.00[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933074	chr4:100460951-100630600	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100600800-100605000	Weak transcription	Fetal Lung	lung
2	chr4:100601600-100608200	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr4:100603800-100605400	Enhancers	Fetal Heart	heart

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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