Variant report

Variant	rs71614611
Chromosome Location	chr4:100635087-100635088
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 18 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs13103481	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs13107620	0.81[AFR][1000 genomes]
rs13120652	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13120855	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs13146743	0.90[AMR][1000 genomes]
rs17029267	0.90[AMR][1000 genomes]
rs34066136	0.81[AFR][1000 genomes]
rs34098936	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs6815796	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6821960	0.85[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs6826436	0.96[EUR][1000 genomes]
rs6830456	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes]
rs71614605	0.81[AFR][1000 genomes]
rs71614608	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs71614609	0.81[AFR][1000 genomes]
rs7667218	0.81[AFR][1000 genomes]
rs7698525	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.84[EUR][1000 genomes]
rs871320	0.90[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100630600-100635200	Weak transcription	Psoas Muscle	Psoas
2	chr4:100631800-100636400	Weak transcription	Left Ventricle	heart
3	chr4:100632800-100637600	Weak transcription	Skeletal Muscle Female	skeletal muscle
4	chr4:100633000-100638200	Weak transcription	Hela-S3	cervix
5	chr4:100633400-100636200	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
6	chr4:100633400-100636200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr4:100633400-100636200	Weak transcription	NHEK	skin
8	chr4:100633600-100636200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
9	chr4:100633600-100636400	Weak transcription	HMEC	breast
10	chr4:100633800-100636400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
11	chr4:100633800-100636400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr4:100634400-100635600	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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