Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:100618918..100621317-chr4:100629954..100633305,3	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs13107620	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13120652	0.81[AFR][1000 genomes]
rs13120855	0.81[AFR][1000 genomes]
rs13121590	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1491236	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17029260	0.85[AMR][1000 genomes]
rs17029263	0.85[AMR][1000 genomes]
rs17029264	0.85[AMR][1000 genomes]
rs17029282	1.00[ASN][1000 genomes]
rs17029297	1.00[ASN][1000 genomes]
rs17029357	1.00[ASN][1000 genomes]
rs17536581	1.00[ASN][1000 genomes]
rs17600994	1.00[ASN][1000 genomes]
rs34066136	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34870956	0.85[AMR][1000 genomes]
rs34874297	0.85[AMR][1000 genomes]
rs35561084	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35595171	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6532827	1.00[ASN][1000 genomes]
rs6815796	0.81[AFR][1000 genomes]
rs6825904	0.85[AMR][1000 genomes]
rs6851824	0.85[AMR][1000 genomes]
rs71614605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71614608	0.81[AFR][1000 genomes]
rs71614611	0.81[AFR][1000 genomes]
rs7667218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7695727	0.85[AMR][1000 genomes]
rs7696714	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv933074	chr4:100460951-100630600	Enhancers Active TSS Weak transcription Flanking Active TSS Strong transcription Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
2	esv3343515	chr4:100617029-100621427	Enhancers Active TSS Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100619000-100620000	Weak transcription	Fetal Muscle Leg	muscle

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