Variant report

Variant	rs7667218
Chromosome Location	chr4:100636509-100636510
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 32 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs13107620	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13120652	0.81[AFR][1000 genomes]
rs13120855	0.81[AFR][1000 genomes]
rs13121590	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13129571	0.84[GIH][hapmap]
rs1491236	1.00[CEU][hapmap];0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17029260	0.85[AMR][1000 genomes]
rs17029263	0.85[AMR][1000 genomes]
rs17029264	0.85[AMR][1000 genomes]
rs17029282	1.00[ASN][1000 genomes]
rs17029297	1.00[ASN][1000 genomes]
rs17029357	1.00[ASN][1000 genomes]
rs17536581	1.00[ASN][1000 genomes]
rs17600994	1.00[ASN][1000 genomes]
rs34066136	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34870956	0.85[AMR][1000 genomes]
rs34874297	0.85[AMR][1000 genomes]
rs35561084	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35595171	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6532821	0.84[GIH][hapmap]
rs6532827	1.00[ASN][1000 genomes]
rs6815796	0.81[AFR][1000 genomes]
rs6825904	0.85[AMR][1000 genomes]
rs6851824	0.85[AMR][1000 genomes]
rs71614605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71614608	0.81[AFR][1000 genomes]
rs71614609	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71614611	0.81[AFR][1000 genomes]
rs7665414	0.84[GIH][hapmap]
rs7695727	0.85[AMR][1000 genomes]
rs7696714	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs871320	1.00[CEU][hapmap]

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100632800-100637600	Weak transcription	Skeletal Muscle Female	skeletal muscle
2	chr4:100633000-100638200	Weak transcription	Hela-S3	cervix
3	chr4:100635600-100638200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
4	chr4:100635800-100637400	Enhancers	Primary hematopoietic stem cells	blood
5	chr4:100635800-100638800	Enhancers	Fetal Intestine Large	intestine
6	chr4:100635800-100638800	Enhancers	Fetal Intestine Small	intestine
7	chr4:100636000-100636600	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
8	chr4:100636000-100636600	Enhancers	Adipose Nuclei	Adipose
9	chr4:100636000-100636800	Enhancers	Cortex derived primary cultured neurospheres	brain
10	chr4:100636000-100636800	Enhancers	Colon Smooth Muscle	Colon
11	chr4:100636000-100638000	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
12	chr4:100636000-100638600	Enhancers	Psoas Muscle	Psoas
13	chr4:100636200-100636600	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
14	chr4:100636200-100637000	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr4:100636200-100637200	Enhancers	NHEK	skin
16	chr4:100636200-100637400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
17	chr4:100636200-100638400	Enhancers	Duodenum Mucosa	Duodenum
18	chr4:100636400-100636600	Enhancers	Left Ventricle	heart
19	chr4:100636400-100636800	Enhancers	Primary hematopoietic stem cells short term culture	blood
20	chr4:100636400-100637000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
21	chr4:100636400-100637000	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
22	chr4:100636400-100637200	Enhancers	HMEC	breast

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