Variant report

Variant	rs34066136
Chromosome Location	chr4:100638522-100638523
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 28 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs13107620	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13120652	0.81[AFR][1000 genomes]
rs13120855	0.81[AFR][1000 genomes]
rs13121590	0.86[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1491236	0.93[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17029260	0.85[AMR][1000 genomes]
rs17029263	0.85[AMR][1000 genomes]
rs17029264	0.85[AMR][1000 genomes]
rs17029282	1.00[ASN][1000 genomes]
rs17029297	1.00[ASN][1000 genomes]
rs17029357	1.00[ASN][1000 genomes]
rs17536581	1.00[ASN][1000 genomes]
rs17600994	1.00[ASN][1000 genomes]
rs34870956	0.85[AMR][1000 genomes]
rs34874297	0.85[AMR][1000 genomes]
rs35561084	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs35595171	0.85[AMR][1000 genomes];0.81[EUR][1000 genomes]
rs6532827	1.00[ASN][1000 genomes]
rs6815796	0.81[AFR][1000 genomes]
rs6825904	0.85[AMR][1000 genomes]
rs6851824	0.85[AMR][1000 genomes]
rs71614605	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71614608	0.81[AFR][1000 genomes]
rs71614609	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs71614611	0.81[AFR][1000 genomes]
rs7667218	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7695727	0.85[AMR][1000 genomes]
rs7696714	0.89[AFR][1000 genomes];0.81[AMR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:100635800-100638800	Enhancers	Fetal Intestine Large	intestine
2	chr4:100635800-100638800	Enhancers	Fetal Intestine Small	intestine
3	chr4:100636000-100638600	Enhancers	Psoas Muscle	Psoas
4	chr4:100636600-100640600	Weak transcription	Adipose Nuclei	Adipose
5	chr4:100636600-100646600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
6	chr4:100636800-100640600	Weak transcription	Cortex derived primary cultured neurospheres	brain
7	chr4:100636800-100641000	Weak transcription	Colon Smooth Muscle	Colon
8	chr4:100637600-100638600	Enhancers	ES-I3 Cell Line	embryonic stem cell
9	chr4:100637600-100638600	Enhancers	Skeletal Muscle Female	skeletal muscle
10	chr4:100637800-100638600	Enhancers	H1 Cell Line	embryonic stem cell
11	chr4:100637800-100638600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
12	chr4:100637800-100638600	Enhancers	Stomach Smooth Muscle	stomach
13	chr4:100637800-100643400	Weak transcription	Left Ventricle	heart
14	chr4:100638000-100641000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
15	chr4:100638000-100643000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
16	chr4:100638200-100638600	Enhancers	iPS-15b Cell Line	embryonic stem cell
17	chr4:100638200-100638600	Enhancers	Hela-S3	cervix
18	chr4:100638200-100643800	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
19	chr4:100638400-100638600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
20	chr4:100638400-100642800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--

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