Variant report

Variant	rs683763
Chromosome Location	chr10:89807680-89807681
allele	A/G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs2471891	0.98[AMR][1000 genomes];0.93[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2673815	0.84[JPT][hapmap]
rs2673817	0.80[JPT][hapmap]
rs479727	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs534182	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs559783	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs563675	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs588307	0.82[AFR][1000 genomes];0.99[AMR][1000 genomes];0.97[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs624597	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.89[AMR][1000 genomes];0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs677422	1.00[CEU][hapmap];1.00[CHB][hapmap];0.94[JPT][hapmap];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs760177	0.81[CHB][hapmap]
rs812629	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:11 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:89801600-89808400	Enhancers	Primary monocytes fromperipheralblood	blood
2	chr10:89802600-89822200	Weak transcription	Aorta	Aorta
3	chr10:89803400-89822000	Weak transcription	Psoas Muscle	Psoas
4	chr10:89803600-89807800	Weak transcription	Skeletal Muscle Female	skeletal muscle
5	chr10:89805000-89808400	Enhancers	Primary hematopoietic stem cells short term culture	blood
6	chr10:89806400-89810800	Enhancers	Dnd41	blood
7	chr10:89806600-89807800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
8	chr10:89806800-89808400	Enhancers	Monocytes-CD14+_RO01746	blood
9	chr10:89806800-89809400	Weak transcription	Lung	lung
10	chr10:89807200-89807800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr10:89807600-89807800	Enhancers	Primary neutrophils fromperipheralblood	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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