Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr4:77006287..77011420-chr4:77011515..77015802,5	K562	blood:

rSNPs within LD-proxies of this variant (count:13)

rs_ID	r²[population]
rs11942837	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4274876	0.94[AFR][1000 genomes]
rs4379080	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4524416	0.97[EUR][1000 genomes]
rs4859613	0.94[AFR][1000 genomes]
rs62318913	0.80[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs6826514	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6828078	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs72655511	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72655512	0.80[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs72655515	0.97[EUR][1000 genomes]
rs7662679	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7683914	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv529613	chr4:76654941-77081576	Flanking Active TSS Weak transcription Genic enhancers Strong transcription Enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	38 gene(s)	inside rSNPs	diseases
2	nsv1009047	chr4:76989180-77077885	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	20 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:76997000-77007200	Weak transcription	Fetal Brain Male	brain
2	chr4:76997000-77008000	Weak transcription	Brain Angular Gyrus	brain
3	chr4:76999000-77008200	Weak transcription	Right Ventricle	heart
4	chr4:76999600-77008000	Weak transcription	Liver	Liver
5	chr4:77003800-77008000	Weak transcription	Brain Anterior Caudate	brain
6	chr4:77003800-77008000	Enhancers	Skeletal Muscle Female	skeletal muscle
7	chr4:77003800-77008000	Weak transcription	K562	blood
8	chr4:77003800-77008200	Weak transcription	Fetal Thymus	thymus
9	chr4:77004800-77008000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
10	chr4:77004800-77008000	Weak transcription	Brain Cingulate Gyrus	brain
11	chr4:77004800-77008000	Weak transcription	Right Atrium	heart
12	chr4:77005000-77007800	Weak transcription	Brain Inferior Temporal Lobe	brain
13	chr4:77005000-77008000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
14	chr4:77005000-77008000	Weak transcription	NHEK	skin
15	chr4:77005000-77008200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
16	chr4:77005400-77007800	Enhancers	Skeletal Muscle Male	skeletal muscle
17	chr4:77005800-77007200	Enhancers	Psoas Muscle	Psoas
18	chr4:77005800-77008000	Enhancers	Fetal Heart	heart
19	chr4:77006200-77007200	Enhancers	Left Ventricle	heart
20	chr4:77006600-77008000	Weak transcription	Fetal Muscle Leg	muscle

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