Variant report

rSNPs within LD-proxies of this variant (count:41)

rs_ID	r²[population]
rs10005129	0.92[CEU][hapmap]
rs10015595	0.92[CEU][hapmap]
rs10016168	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10018906	0.84[CEU][hapmap]
rs10029471	0.92[CEU][hapmap]
rs10032643	0.92[CEU][hapmap]
rs10805150	0.84[CEU][hapmap]
rs10938455	0.91[CEU][hapmap]
rs10938456	0.92[CEU][hapmap]
rs10938457	0.92[CEU][hapmap]
rs1124442	0.84[CEU][hapmap]
rs11934342	0.92[CEU][hapmap]
rs11946667	0.92[CEU][hapmap]
rs11947685	0.92[CEU][hapmap]
rs12503660	0.88[CEU][hapmap]
rs12503816	0.84[CEU][hapmap]
rs12504855	0.84[CEU][hapmap]
rs12505727	0.88[CEU][hapmap]
rs12508418	0.92[CEU][hapmap]
rs12509566	0.91[CEU][hapmap]
rs12511771	0.92[CEU][hapmap]
rs12511862	0.92[CEU][hapmap]
rs12512515	0.92[CEU][hapmap]
rs2175554	0.84[CEU][hapmap]
rs2203139	0.84[CEU][hapmap]
rs2350889	0.84[CEU][hapmap]
rs28393671	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4129828	0.92[CHD][hapmap]
rs4478161	0.85[MKK][hapmap]
rs6813531	0.87[CEU][hapmap]
rs6817647	0.82[CHD][hapmap]
rs6831990	0.92[CEU][hapmap]
rs6835325	0.91[CEU][hapmap]
rs6838604	0.91[CEU][hapmap]
rs6855790	0.92[CEU][hapmap]
rs7435882	0.91[CEU][hapmap]
rs7438079	0.92[CEU][hapmap]
rs9996022	0.92[CEU][hapmap]
rs9997648	0.83[CEU][hapmap]
rs9998421	0.92[CEU][hapmap]
rs9999799	0.92[CEU][hapmap]

Variant overlapped rSNPs/rCNVs (count:7 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv878996	chr4:46555042-46734901	Weak transcription Enhancers Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
2	nsv878997	chr4:46565663-46734901	Enhancers ZNF genes & repeats Active TSS Weak transcription	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv878998	chr4:46565663-46823634	Enhancers ZNF genes & repeats Active TSS Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv878999	chr4:46565663-46860626	Enhancers Active TSS Weak transcription ZNF genes & repeats Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
5	nsv461356	chr4:46635167-46846042	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv594117	chr4:46635167-46846042	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv879000	chr4:46635167-46890046	Enhancers ZNF genes & repeats Weak transcription Active TSS Bivalent Enhancer Flanking Active TSS	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:46720800-46722600	Weak transcription	Fetal Brain Male	brain

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