Variant report

Variant rs6865127
Chromosome Location chr5:111753570-111753571
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:111728800-111753600 Weak transcription Rectal Mucosa Donor 31 rectum
2 chr5:111730400-111753800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr5:111746600-111753800 Weak transcription Spleen Spleen
4 chr5:111748000-111753600 Weak transcription Pancreas Pancrea
5 chr5:111748000-111754200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:111748600-111753600 Weak transcription Left Ventricle heart
7 chr5:111749400-111753600 Weak transcription Lung lung
8 chr5:111749600-111753600 Weak transcription Esophagus oesophagus
9 chr5:111749600-111753600 Weak transcription Gastric stomach
10 chr5:111749600-111753600 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr5:111749800-111753600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
12 chr5:111752200-111753600 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
13 chr5:111752400-111754000 Active TSS Fetal Brain Female brain
14 chr5:111752600-111753600 Enhancers Brain Germinal Matrix brain
15 chr5:111752800-111754200 Flanking Active TSS Fetal Brain Male brain
16 chr5:111752800-111755200 Active TSS Psoas Muscle Psoas
17 chr5:111752800-111756200 Active TSS Right Atrium heart
18 chr5:111752800-111756400 Active TSS Aorta Aorta
19 chr5:111753000-111753600 Flanking Bivalent TSS/Enh hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr5:111753000-111753600 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr5:111753000-111754400 Flanking Active TSS HUVEC blood vessel
22 chr5:111753000-111756400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr5:111753000-111756600 Active TSS Pancreatic Islets Pancreatic Islet
24 chr5:111753200-111756400 Active TSS Fetal Heart heart
25 chr5:111753400-111753600 Bivalent Enhancer HUES48 Cell Line embryonic stem cell
26 chr5:111753400-111753600 Flanking Bivalent TSS/Enh iPS-15b Cell Line embryonic stem cell
27 chr5:111753400-111753600 Flanking Bivalent TSS/Enh iPS-18 Cell Line embryonic stem cell
28 chr5:111753400-111753600 Flanking Bivalent TSS/Enh iPS-20b Cell Line embryonic stem cell
29 chr5:111753400-111753600 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr5:111753400-111753600 Bivalent Enhancer Primary B cells from cord blood blood
31 chr5:111753400-111753600 Bivalent Enhancer Primary T cells effector/memory enriched fromperipheralblood blood
32 chr5:111753400-111753600 Active TSS Ganglion Eminence derived primary cultured neurospheres brain
33 chr5:111753400-111753600 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr5:111753400-111753600 Flanking Active TSS Adipose Nuclei Adipose
35 chr5:111753400-111753600 Flanking Active TSS Brain Anterior Caudate brain
36 chr5:111753400-111753600 Flanking Bivalent TSS/Enh Duodenum Smooth Muscle Duodenum
37 chr5:111753400-111753600 Enhancers Fetal Lung lung
38 chr5:111753400-111753600 Active TSS Skeletal Muscle Male skeletal muscle
39 chr5:111753400-111753600 Bivalent/Poised TSS Skeletal Muscle Female skeletal muscle
40 chr5:111753400-111753600 Bivalent Enhancer A549 lung
41 chr5:111753400-111753600 Flanking Active TSS Hela-S3 cervix
42 chr5:111753400-111753600 Enhancers NHEK skin
43 chr5:111753400-111753800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr5:111753400-111753800 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
45 chr5:111753400-111753800 Flanking Active TSS Cortex derived primary cultured neurospheres brain
46 chr5:111753400-111753800 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
47 chr5:111753400-111753800 Flanking Active TSS Brain Hippocampus Middle brain
48 chr5:111753400-111754000 Active TSS Fetal Adrenal Gland Adrenal Gland
49 chr5:111753400-111754000 Bivalent/Poised TSS Fetal Muscle Leg muscle
50 chr5:111753400-111754000 Bivalent/Poised TSS GM12878-XiMat blood

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