Variant report

Variant	rs6868687
Chromosome Location	chr5:35098883-35098884
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs16871732	1.00[AMR][1000 genomes]
rs16871815	1.00[AMR][1000 genomes]
rs6875116	1.00[AMR][1000 genomes]
rs6884214	1.00[AMR][1000 genomes]
rs73767516	1.00[AMR][1000 genomes]
rs73767518	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73767520	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv4790	chr5:35090745-35123632	Enhancers Weak transcription Strong transcription Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35088800-35114000	Weak transcription	Primary monocytes fromperipheralblood	blood
2	chr5:35089800-35113800	Weak transcription	Monocytes-CD14+_RO01746	blood
3	chr5:35092800-35100800	Weak transcription	Placenta	Placenta
4	chr5:35093600-35104200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
5	chr5:35093800-35103200	Weak transcription	Fetal Intestine Large	intestine
6	chr5:35096600-35114400	Weak transcription	Stomach Mucosa	stomach
7	chr5:35097400-35099200	Enhancers	Liver	Liver
8	chr5:35097400-35100400	Strong transcription	Fetal Intestine Small	intestine
9	chr5:35098600-35104000	Weak transcription	HepG2	liver

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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