Variant report
| Variant | rs6874866 |
|---|---|
| Chromosome Location | chr5:147062987-147062988 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:147042000-147076800 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 2 | chr5:147051400-147068200 | Weak transcription | iPS-20b Cell Line | embryonic stem cell |
| 3 | chr5:147051400-147070400 | Weak transcription | HUES48 Cell Line | embryonic stem cell |
| 4 | chr5:147051400-147076600 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 5 | chr5:147051600-147066600 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |
| 6 | chr5:147051600-147075600 | Weak transcription | HUES64 Cell Line | embryonic stem cell |
| 7 | chr5:147051600-147077000 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 8 | chr5:147051600-147078400 | Weak transcription | Primary T cells from cord blood | blood |
| 9 | chr5:147051800-147076800 | Weak transcription | Primary hematopoietic stem cells | blood |
| 10 | chr5:147053400-147064800 | Weak transcription | Brain Germinal Matrix | brain |
| 11 | chr5:147054200-147064000 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
| 12 | chr5:147054400-147065400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
| 13 | chr5:147054600-147065400 | Weak transcription | Brain Angular Gyrus | brain |
| 14 | chr5:147056400-147065400 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 15 | chr5:147060400-147072600 | Weak transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 16 | chr5:147061000-147065600 | Weak transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 17 | chr5:147062200-147064000 | Weak transcription | Brain Anterior Caudate | brain |
| 18 | chr5:147062400-147065400 | Weak transcription | Brain Cingulate Gyrus | brain |
| 19 | chr5:147062800-147063400 | Enhancers | Pancreatic Islets | Pancreatic Islet |
| 20 | chr5:147062800-147064400 | Weak transcription | Brain Substantia Nigra | brain |
