Variant report
| Variant | rs687850 |
|---|---|
| Chromosome Location | chr18:29897276-29897277 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr18:29868200-29923800 | Weak transcription | Gastric | stomach |
| 2 | chr18:29889400-29904200 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 3 | chr18:29890200-29898800 | Weak transcription | Liver | Liver |
| 4 | chr18:29890200-29902200 | Weak transcription | Spleen | Spleen |
| 5 | chr18:29890400-29904000 | Weak transcription | Breast Myoepithelial Primary Cells | Breast |
| 6 | chr18:29891000-29897400 | Weak transcription | Fetal Kidney | kidney |
| 7 | chr18:29891000-29898400 | Weak transcription | Stomach Smooth Muscle | stomach |
| 8 | chr18:29891000-29905800 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 9 | chr18:29891000-29914000 | Weak transcription | Fetal Brain Female | brain |
| 10 | chr18:29891200-29905600 | Weak transcription | Rectal Smooth Muscle | rectum |
| 11 | chr18:29893400-29897400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 12 | chr18:29893400-29897800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 13 | chr18:29893400-29903200 | Weak transcription | Pancreas | Pancrea |
| 14 | chr18:29894200-29897800 | Weak transcription | Small Intestine | intestine |
| 15 | chr18:29895600-29897600 | Enhancers | HSMM | muscle |
| 16 | chr18:29895800-29897400 | Enhancers | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 17 | chr18:29895800-29897800 | Enhancers | Stomach Mucosa | stomach |
| 18 | chr18:29895800-29898600 | Enhancers | Brain Cingulate Gyrus | brain |
| 19 | chr18:29895800-29898800 | Enhancers | Foreskin Fibroblast Primary Cells skin01 | Skin |
| 20 | chr18:29895800-29898800 | Enhancers | Osteobl | bone |
| 21 | chr18:29896000-29899200 | Enhancers | Brain Substantia Nigra | brain |
| 22 | chr18:29896200-29898400 | Weak transcription | Fetal Heart | heart |
| 23 | chr18:29896400-29897400 | Enhancers | IMR90 fetal lung fibroblasts Cell Line | lung |
| 24 | chr18:29896400-29897400 | Enhancers | Ovary | ovary |
| 25 | chr18:29896400-29899200 | Enhancers | Fetal Muscle Leg | muscle |
| 26 | chr18:29896600-29900000 | Enhancers | Adipose Nuclei | Adipose |
| 27 | chr18:29896800-29897400 | Enhancers | Esophagus | oesophagus |
| 28 | chr18:29896800-29897400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 29 | chr18:29896800-29898000 | Enhancers | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 30 | chr18:29896800-29898000 | Enhancers | Brain Angular Gyrus | brain |
| 31 | chr18:29896800-29898000 | Enhancers | Hela-S3 | cervix |
| 32 | chr18:29896800-29898400 | Enhancers | Brain Anterior Caudate | brain |
| 33 | chr18:29896800-29899800 | Enhancers | HepG2 | liver |
| 34 | chr18:29897000-29897400 | Flanking Active TSS | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 35 | chr18:29897000-29897400 | Weak transcription | Brain Hippocampus Middle | brain |
| 36 | chr18:29897000-29897400 | Enhancers | Left Ventricle | heart |
| 37 | chr18:29897000-29897400 | Enhancers | Lung | lung |
| 38 | chr18:29897000-29897800 | Enhancers | HUES6 Cell Line | embryonic stem cell |
| 39 | chr18:29897000-29897800 | Enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 40 | chr18:29897000-29897800 | Enhancers | NHEK | skin |
| 41 | chr18:29897000-29898000 | Enhancers | ES-I3 Cell Line | embryonic stem cell |
| 42 | chr18:29897000-29898000 | Enhancers | Fetal Intestine Small | intestine |
| 43 | chr18:29897000-29898200 | Enhancers | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 44 | chr18:29897000-29898200 | Flanking Active TSS | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 45 | chr18:29897000-29898200 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 46 | chr18:29897000-29898200 | Enhancers | NH-A | brain |
| 47 | chr18:29897000-29898400 | Flanking Active TSS | Muscle Satellite Cultured Cells | -- |
| 48 | chr18:29897000-29898600 | Weak transcription | Aorta | Aorta |
| 49 | chr18:29897000-29898800 | Enhancers | Fetal Lung | lung |
| 50 | chr18:29897200-29897400 | Enhancers | Brain Inferior Temporal Lobe | brain |
