Variant report

Variant rs6892980
Chromosome Location chr5:118635662-118635663
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:36 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118625400-118637200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr5:118627600-118635800 Weak transcription Thymus Thymus
3 chr5:118628000-118637000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr5:118628000-118637000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
5 chr5:118628000-118637200 Weak transcription Primary hematopoietic stem cells blood
6 chr5:118628000-118637800 Weak transcription Aorta Aorta
7 chr5:118628000-118641000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr5:118628200-118635800 Weak transcription Primary B cells from cord blood blood
9 chr5:118634800-118635800 Enhancers Primary B cells from peripheral blood blood
10 chr5:118634800-118635800 Active TSS Primary T killer memory cells from peripheral blood blood
11 chr5:118635000-118635800 Active TSS Primary T helper cells PMA-I stimulated --
12 chr5:118635000-118635800 Active TSS Primary T helper 17 cells PMA-I stimulated --
13 chr5:118635000-118635800 Active TSS Primary T helper cells fromperipheralblood blood
14 chr5:118635000-118636000 ZNF genes & repeats Fetal Thymus thymus
15 chr5:118635000-118636200 Enhancers Pancreas Pancrea
16 chr5:118635000-118637000 Enhancers Primary Natural Killer cells fromperipheralblood blood
17 chr5:118635000-118638600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
18 chr5:118635200-118635800 Active TSS Primary T regulatory cells fromperipheralblood blood
19 chr5:118635400-118635800 Active TSS HUES6 Cell Line embryonic stem cell
20 chr5:118635400-118635800 Active TSS Primary T cells from cord blood blood
21 chr5:118635400-118635800 Active TSS Primary T helper naive cells fromperipheralblood blood
22 chr5:118635400-118635800 Active TSS Primary T helper memory cells from peripheral blood 1 blood
23 chr5:118635400-118635800 Active TSS K562 blood
24 chr5:118635400-118636000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
25 chr5:118635400-118636000 Active TSS HepG2 liver
26 chr5:118635400-118638200 Enhancers Dnd41 blood
27 chr5:118635400-118643800 Enhancers Primary neutrophils fromperipheralblood blood
28 chr5:118635600-118635800 Active TSS Primary T helper memory cells from peripheral blood 2 blood
29 chr5:118635600-118635800 Active TSS Primary T helper naive cells from peripheral blood blood
30 chr5:118635600-118635800 Active TSS A549 lung
31 chr5:118635600-118636000 ZNF genes & repeats H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr5:118635600-118636000 Flanking Active TSS Primary T cells fromperipheralblood blood
33 chr5:118635600-118636000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
34 chr5:118635600-118636000 Active TSS Duodenum Mucosa Duodenum
35 chr5:118635600-118636400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
36 chr5:118635600-118640800 Enhancers Primary mononuclear cells fromperipheralblood Blood

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