The 2.0 version of rSNPBase

Variant report

Variant rs7701688
Chromosome Location chr5:118649135-118649136
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:63 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118637000-118653200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr5:118638800-118649400 Weak transcription HUES64 Cell Line embryonic stem cell
3 chr5:118639200-118649600 Weak transcription Stomach Smooth Muscle stomach
4 chr5:118639200-118657200 Weak transcription Lung lung
5 chr5:118639200-118658400 Enhancers Primary T helper cells fromperipheralblood blood
6 chr5:118639400-118653800 Weak transcription Fetal Kidney kidney
7 chr5:118639600-118657000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
8 chr5:118640400-118658800 Weak transcription Fetal Intestine Small intestine
9 chr5:118640400-118659200 Weak transcription Rectal Mucosa Donor 31 rectum
10 chr5:118640600-118654000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
11 chr5:118640800-118651200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
12 chr5:118641200-118651200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
13 chr5:118641800-118657200 Weak transcription Pancreas Pancrea
14 chr5:118644400-118649400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
15 chr5:118644400-118658000 Weak transcription Small Intestine intestine
16 chr5:118645000-118650400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
17 chr5:118645000-118651200 Weak transcription NH-A brain
18 chr5:118645200-118649600 Enhancers Primary hematopoietic stem cells blood
19 chr5:118645200-118649600 Weak transcription Placenta Placenta
20 chr5:118645200-118664000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr5:118645400-118652000 Enhancers Primary T regulatory cells fromperipheralblood blood
22 chr5:118645400-118652000 Enhancers Primary T killer naive cells fromperipheralblood blood
23 chr5:118645600-118649800 Weak transcription Right Atrium heart
24 chr5:118645800-118653200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr5:118645800-118661800 Enhancers Primary T killer memory cells from peripheral blood blood
26 chr5:118646000-118650000 Genic enhancers Primary Natural Killer cells fromperipheralblood blood
27 chr5:118646000-118651400 Enhancers Thymus Thymus
28 chr5:118646000-118653400 Weak transcription Spleen Spleen
29 chr5:118646000-118657200 Weak transcription Duodenum Mucosa Duodenum
30 chr5:118646200-118649800 Enhancers GM12878-XiMat blood
31 chr5:118646200-118651200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr5:118646200-118653400 Enhancers Primary neutrophils fromperipheralblood blood
33 chr5:118646400-118649600 Weak transcription Fetal Stomach stomach
34 chr5:118646400-118651000 Enhancers Primary T helper 17 cells PMA-I stimulated --
35 chr5:118646400-118657200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr5:118646600-118650600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:118646600-118651200 Enhancers Primary T helper naive cells from peripheral blood blood
38 chr5:118646600-118656200 Weak transcription Sigmoid Colon Sigmoid Colon
39 chr5:118646600-118658800 Weak transcription Rectal Mucosa Donor 29 rectum
40 chr5:118646800-118649600 Enhancers Dnd41 blood
41 chr5:118646800-118651000 Weak transcription Monocytes-CD14+_RO01746 blood
42 chr5:118647000-118650800 Enhancers Primary T helper naive cells fromperipheralblood blood
43 chr5:118647000-118651200 Weak transcription Primary monocytes fromperipheralblood blood
44 chr5:118647000-118651200 Enhancers Primary T cells fromperipheralblood blood
45 chr5:118647000-118651600 Enhancers Fetal Thymus thymus
46 chr5:118648000-118653000 Enhancers Primary hematopoietic stem cells short term culture blood
47 chr5:118648000-118664600 Enhancers Primary B cells from peripheral blood blood
48 chr5:118648200-118649400 Weak transcription iPS-15b Cell Line embryonic stem cell
49 chr5:118648400-118651000 Genic enhancers Primary B cells from cord blood blood
50 chr5:118648800-118649200 Weak transcription HUES6 Cell Line embryonic stem cell

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Last update: Aug 31, 2015