The 2.0 version of rSNPBase

Variant report

Variant rs73790852
Chromosome Location chr5:118725138-118725139
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:97 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118702800-118736000 Weak transcription Fetal Muscle Leg muscle
2 chr5:118704400-118728400 Weak transcription Hela-S3 cervix
3 chr5:118707600-118754600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr5:118709400-118727800 Weak transcription Dnd41 blood
5 chr5:118711400-118728400 Weak transcription A549 lung
6 chr5:118711800-118725800 Enhancers Primary T helper naive cells fromperipheralblood blood
7 chr5:118712400-118726400 Enhancers Primary T killer memory cells from peripheral blood blood
8 chr5:118712400-118732600 Genic enhancers Primary B cells from peripheral blood blood
9 chr5:118712800-118726200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
10 chr5:118714000-118725200 Weak transcription H1 Cell Line embryonic stem cell
11 chr5:118714400-118725200 Weak transcription Aorta Aorta
12 chr5:118714400-118729200 Weak transcription HSMMtube muscle
13 chr5:118715400-118728800 Weak transcription Placenta Placenta
14 chr5:118717200-118731000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:118718600-118725200 Weak transcription Stomach Mucosa stomach
16 chr5:118718600-118726400 Weak transcription Primary neutrophils fromperipheralblood blood
17 chr5:118718600-118737600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
18 chr5:118720600-118728600 Weak transcription Thymus Thymus
19 chr5:118721600-118726800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
20 chr5:118721800-118726000 Enhancers Primary T helper naive cells from peripheral blood blood
21 chr5:118721800-118728800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr5:118722000-118725400 Enhancers ES-I3 Cell Line embryonic stem cell
23 chr5:118722000-118725800 Enhancers Adipose Nuclei Adipose
24 chr5:118722400-118725200 Enhancers Osteobl bone
25 chr5:118722400-118727200 Enhancers Primary monocytes fromperipheralblood blood
26 chr5:118722600-118728600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
27 chr5:118722600-118730600 Weak transcription Lung lung
28 chr5:118722600-118733600 Weak transcription Small Intestine intestine
29 chr5:118722800-118731200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
30 chr5:118723000-118734800 Weak transcription Gastric stomach
31 chr5:118723000-118747600 Weak transcription Pancreas Pancrea
32 chr5:118723400-118726400 Enhancers Colon Smooth Muscle Colon
33 chr5:118723600-118725200 Enhancers Primary T killer naive cells fromperipheralblood blood
34 chr5:118723600-118725600 Transcr. at gene 5' and 3' GM12878-XiMat blood
35 chr5:118723600-118727800 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr5:118723800-118725400 Enhancers Primary mononuclear cells fromperipheralblood Blood
37 chr5:118723800-118732400 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
38 chr5:118724000-118725400 Enhancers Spleen Spleen
39 chr5:118724000-118726000 Enhancers Fetal Heart heart
40 chr5:118724000-118728400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr5:118724200-118726400 Enhancers Primary B cells from cord blood blood
42 chr5:118724200-118728600 Genic enhancers Primary T helper cells PMA-I stimulated --
43 chr5:118724200-118734800 Weak transcription Breast Myoepithelial Primary Cells Breast
44 chr5:118724400-118725400 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr5:118724400-118725800 Enhancers Fetal Stomach stomach
46 chr5:118724400-118728600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr5:118724400-118728600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
48 chr5:118724400-118728600 Weak transcription NHEK skin
49 chr5:118724400-118729200 Weak transcription HMEC breast
50 chr5:118724600-118725600 Enhancers Sigmoid Colon Sigmoid Colon

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Last update: Aug 31, 2015