Variant report

Variant rs17385942
Chromosome Location chr5:118715608-118715609
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:62 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118702800-118720000 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr5:118702800-118720800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
3 chr5:118702800-118722400 Weak transcription Spleen Spleen
4 chr5:118702800-118723800 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr5:118702800-118736000 Weak transcription Fetal Muscle Leg muscle
6 chr5:118704400-118722800 Weak transcription HMEC breast
7 chr5:118704400-118728400 Weak transcription Hela-S3 cervix
8 chr5:118704600-118723400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr5:118706400-118720600 Weak transcription Small Intestine intestine
10 chr5:118706600-118722400 Weak transcription Primary monocytes fromperipheralblood blood
11 chr5:118706800-118717800 Weak transcription Primary neutrophils fromperipheralblood blood
12 chr5:118707400-118718600 Genic enhancers Primary T cells fromperipheralblood blood
13 chr5:118707600-118754600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
14 chr5:118707800-118716800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
15 chr5:118709400-118719800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
16 chr5:118709400-118727800 Weak transcription Dnd41 blood
17 chr5:118709600-118723400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:118711400-118728400 Weak transcription A549 lung
19 chr5:118711800-118725800 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr5:118712200-118724600 Enhancers Primary T helper cells fromperipheralblood blood
21 chr5:118712400-118726400 Enhancers Primary T killer memory cells from peripheral blood blood
22 chr5:118712400-118732600 Genic enhancers Primary B cells from peripheral blood blood
23 chr5:118712800-118717200 Enhancers Primary T helper naive cells from peripheral blood blood
24 chr5:118712800-118726200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
25 chr5:118713000-118721200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
26 chr5:118713600-118716000 Enhancers HUES6 Cell Line embryonic stem cell
27 chr5:118713600-118717200 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
28 chr5:118713600-118717800 Genic enhancers Primary T helper cells PMA-I stimulated --
29 chr5:118713800-118716200 Enhancers Fetal Heart heart
30 chr5:118713800-118716400 Enhancers Primary T regulatory cells fromperipheralblood blood
31 chr5:118714000-118719400 Genic enhancers Primary T cells from cord blood blood
32 chr5:118714000-118721000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr5:118714000-118722000 Weak transcription ES-I3 Cell Line embryonic stem cell
34 chr5:118714000-118723400 Weak transcription Monocytes-CD14+_RO01746 blood
35 chr5:118714000-118725200 Weak transcription H1 Cell Line embryonic stem cell
36 chr5:118714200-118721000 Weak transcription iPS-15b Cell Line embryonic stem cell
37 chr5:118714400-118719000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr5:118714400-118720400 Weak transcription Fetal Lung lung
39 chr5:118714400-118722200 Weak transcription H9 Cell Line embryonic stem cell
40 chr5:118714400-118725200 Weak transcription Aorta Aorta
41 chr5:118714400-118729200 Weak transcription HSMMtube muscle
42 chr5:118714600-118716200 Enhancers Fetal Stomach stomach
43 chr5:118714600-118720200 Genic enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr5:118714800-118719000 Weak transcription Adipose Nuclei Adipose
45 chr5:118715000-118715800 Enhancers Primary hematopoietic stem cells blood
46 chr5:118715000-118715800 Enhancers K562 blood
47 chr5:118715000-118716200 Enhancers Stomach Smooth Muscle stomach
48 chr5:118715000-118716600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
49 chr5:118715000-118720400 Genic enhancers GM12878-XiMat blood
50 chr5:118715000-118722400 Weak transcription Osteobl bone

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