Variant report

Variant rs28943596
Chromosome Location chr5:118877949-118877950
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118804200-118879600 Weak transcription Primary T killer memory cells from peripheral blood blood
2 chr5:118832400-118878200 Weak transcription NH-A brain
3 chr5:118840200-118878400 Weak transcription Psoas Muscle Psoas
4 chr5:118841000-118880000 Weak transcription Brain Germinal Matrix brain
5 chr5:118841200-118880000 Weak transcription A549 lung
6 chr5:118846800-118878200 Weak transcription NHLF lung
7 chr5:118847200-118878200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr5:118847200-118879800 Weak transcription H9 Cell Line embryonic stem cell
9 chr5:118847400-118878200 Weak transcription Rectal Smooth Muscle rectum
10 chr5:118847400-118879800 Weak transcription HSMMtube muscle
11 chr5:118847600-118878200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr5:118847600-118879800 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr5:118852800-118878200 Weak transcription Aorta Aorta
14 chr5:118853000-118880200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
15 chr5:118853400-118878200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr5:118853400-118878200 Weak transcription Esophagus oesophagus
17 chr5:118853400-118878200 Weak transcription Gastric stomach
18 chr5:118854400-118878400 Weak transcription Spleen Spleen
19 chr5:118854400-118879600 Weak transcription Fetal Kidney kidney
20 chr5:118854400-118880600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr5:118854800-118878200 Weak transcription Thymus Thymus
22 chr5:118855600-118878200 Weak transcription Fetal Stomach stomach
23 chr5:118856200-118878400 Weak transcription Right Ventricle heart
24 chr5:118857200-118878200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
25 chr5:118860600-118879200 Strong transcription Liver Liver
26 chr5:118861400-118879800 Weak transcription HepG2 liver
27 chr5:118861600-118878600 Weak transcription Hela-S3 cervix
28 chr5:118862000-118879800 Weak transcription HSMM muscle
29 chr5:118862000-118880200 Weak transcription Fetal Lung lung
30 chr5:118863600-118879200 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
31 chr5:118864000-118878200 Weak transcription Primary T cells fromperipheralblood blood
32 chr5:118864000-118878200 Weak transcription Osteobl bone
33 chr5:118864200-118879800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
34 chr5:118864200-118880200 Weak transcription Colon Smooth Muscle Colon
35 chr5:118864400-118880200 Weak transcription Fetal Brain Female brain
36 chr5:118865800-118879400 Strong transcription HUES48 Cell Line embryonic stem cell
37 chr5:118866000-118883200 Weak transcription iPS-15b Cell Line embryonic stem cell
38 chr5:118866400-118879800 Weak transcription Primary T killer naive cells fromperipheralblood blood
39 chr5:118866400-118880000 Weak transcription Muscle Satellite Cultured Cells --
40 chr5:118867000-118878400 Weak transcription NHDF-Ad bronchial
41 chr5:118869400-118880000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr5:118869600-118880000 Weak transcription K562 blood
43 chr5:118870400-118878600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
44 chr5:118870800-118878600 Strong transcription HUES64 Cell Line embryonic stem cell
45 chr5:118871400-118878600 Strong transcription iPS-18 Cell Line embryonic stem cell
46 chr5:118871800-118878400 Strong transcription Primary T helper cells fromperipheralblood blood
47 chr5:118871800-118878600 Strong transcription iPS-20b Cell Line embryonic stem cell
48 chr5:118871800-118878600 Strong transcription Primary B cells from peripheral blood blood
49 chr5:118871800-118878800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
50 chr5:118871800-118878800 Strong transcription Monocytes-CD14+_RO01746 blood

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