Variant report
| Variant | rs56050317 |
|---|---|
| Chromosome Location | chr5:118805247-118805248 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr5:118789000-118805400 | Weak transcription | Ovary | ovary |
| 2 | chr5:118789000-118805400 | Weak transcription | Spleen | Spleen |
| 3 | chr5:118789000-118811800 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 4 | chr5:118789000-118813200 | Weak transcription | Fetal Muscle Trunk | muscle |
| 5 | chr5:118789000-118826800 | Weak transcription | Primary T helper 17 cells PMA-I stimulated | -- |
| 6 | chr5:118789200-118805400 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 7 | chr5:118789200-118805600 | Weak transcription | Gastric | stomach |
| 8 | chr5:118789200-118813200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 9 | chr5:118789400-118831200 | Weak transcription | NH-A | brain |
| 10 | chr5:118789400-118831600 | Weak transcription | HSMMtube | muscle |
| 11 | chr5:118789600-118810600 | Weak transcription | Osteobl | bone |
| 12 | chr5:118789600-118812000 | Weak transcription | A549 | lung |
| 13 | chr5:118789600-118813400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 14 | chr5:118789600-118813600 | Weak transcription | Stomach Smooth Muscle | stomach |
| 15 | chr5:118789800-118811000 | Weak transcription | Brain Angular Gyrus | brain |
| 16 | chr5:118789800-118813800 | Weak transcription | Fetal Kidney | kidney |
| 17 | chr5:118789800-118814400 | Weak transcription | Skeletal Muscle Male | skeletal muscle |
| 18 | chr5:118790000-118812600 | Weak transcription | Fetal Brain Male | brain |
| 19 | chr5:118790200-118813400 | Weak transcription | Aorta | Aorta |
| 20 | chr5:118791800-118846600 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 21 | chr5:118792400-118815000 | Weak transcription | K562 | blood |
| 22 | chr5:118793400-118810000 | Weak transcription | Placenta | Placenta |
| 23 | chr5:118793400-118812200 | Weak transcription | Brain Inferior Temporal Lobe | brain |
| 24 | chr5:118794800-118861200 | Weak transcription | HSMM | muscle |
| 25 | chr5:118795200-118813400 | Weak transcription | Small Intestine | intestine |
| 26 | chr5:118795400-118805600 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 27 | chr5:118795400-118806000 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 28 | chr5:118800800-118805800 | ZNF genes & repeats | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 29 | chr5:118801200-118805400 | Weak transcription | H9 Cell Line | embryonic stem cell |
| 30 | chr5:118801800-118805600 | Weak transcription | ES-UCSF4 Cell Line | embryonic stem cell |
| 31 | chr5:118802400-118805400 | ZNF genes & repeats | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 32 | chr5:118802800-118805800 | ZNF genes & repeats | Fetal Lung | lung |
| 33 | chr5:118802800-118806000 | ZNF genes & repeats | Breast Myoepithelial Primary Cells | Breast |
| 34 | chr5:118803200-118805400 | Weak transcription | Pancreas | Pancrea |
| 35 | chr5:118803200-118805600 | ZNF genes & repeats | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 36 | chr5:118803200-118805600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 37 | chr5:118803200-118805800 | Weak transcription | Foreskin Fibroblast Primary Cells skin02 | Skin |
| 38 | chr5:118803400-118805400 | ZNF genes & repeats | Duodenum Mucosa | Duodenum |
| 39 | chr5:118803400-118806400 | ZNF genes & repeats | Primary B cells from peripheral blood | blood |
| 40 | chr5:118803600-118805800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
| 41 | chr5:118803800-118805400 | ZNF genes & repeats | Primary T helper cells fromperipheralblood | blood |
| 42 | chr5:118803800-118806400 | ZNF genes & repeats | GM12878-XiMat | blood |
| 43 | chr5:118804200-118805800 | ZNF genes & repeats | Primary hematopoietic stem cells short term culture | blood |
| 44 | chr5:118804200-118813600 | Weak transcription | Colon Smooth Muscle | Colon |
| 45 | chr5:118804200-118879600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 46 | chr5:118804400-118805400 | Weak transcription | H1 Cell Line | embryonic stem cell |
| 47 | chr5:118804400-118805400 | Weak transcription | Rectal Mucosa Donor 29 | rectum |
| 48 | chr5:118804400-118806200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 49 | chr5:118804400-118808400 | Weak transcription | Foreskin Keratinocyte Primary Cells skin03 | Skin |
| 50 | chr5:118804400-118809400 | Weak transcription | Sigmoid Colon | Sigmoid Colon |
