The 2.0 version of rSNPBase

Variant report

Variant rs57598751
Chromosome Location chr5:118684356-118684357
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118670800-118691000 Weak transcription Aorta Aorta
2 chr5:118671200-118695400 Weak transcription A549 lung
3 chr5:118674200-118689000 Weak transcription Esophagus oesophagus
4 chr5:118674400-118689000 Weak transcription Gastric stomach
5 chr5:118676800-118689000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr5:118676800-118691400 Weak transcription Lung lung
7 chr5:118677000-118686000 Enhancers Primary neutrophils fromperipheralblood blood
8 chr5:118677200-118686800 Enhancers Primary T killer naive cells fromperipheralblood blood
9 chr5:118678000-118690600 Weak transcription NHEK skin
10 chr5:118678200-118684600 Weak transcription ES-WA7 Cell Line embryonic stem cell
11 chr5:118678800-118686400 Enhancers Primary T killer memory cells from peripheral blood blood
12 chr5:118679000-118690600 Weak transcription Fetal Intestine Small intestine
13 chr5:118679000-118690800 Weak transcription Rectal Smooth Muscle rectum
14 chr5:118679800-118689400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr5:118680200-118690400 Weak transcription Stomach Mucosa stomach
16 chr5:118680200-118690600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
17 chr5:118680200-118690600 Weak transcription Colonic Mucosa Colon
18 chr5:118680400-118689000 Weak transcription Placenta Placenta
19 chr5:118680400-118690600 Enhancers Primary T helper naive cells fromperipheralblood blood
20 chr5:118680800-118691000 Weak transcription HSMMtube muscle
21 chr5:118681600-118684800 Genic enhancers Primary T cells from cord blood blood
22 chr5:118681800-118685400 Enhancers HUES6 Cell Line embryonic stem cell
23 chr5:118681800-118685400 Genic enhancers Primary T cells fromperipheralblood blood
24 chr5:118682000-118684600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr5:118682000-118684600 Weak transcription Duodenum Mucosa Duodenum
26 chr5:118682000-118685800 Enhancers iPS-15b Cell Line embryonic stem cell
27 chr5:118682000-118689200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
28 chr5:118682000-118689200 Enhancers Primary T helper cells fromperipheralblood blood
29 chr5:118682000-118689200 Weak transcription Rectal Mucosa Donor 31 rectum
30 chr5:118682000-118689600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
31 chr5:118682200-118685800 Enhancers HUES48 Cell Line embryonic stem cell
32 chr5:118682200-118687800 Weak transcription Fetal Thymus thymus
33 chr5:118682200-118688200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
34 chr5:118682200-118689600 Weak transcription Pancreas Pancrea
35 chr5:118682600-118684600 Weak transcription Primary monocytes fromperipheralblood blood
36 chr5:118682600-118684600 Enhancers Primary B cells from cord blood blood
37 chr5:118682600-118685400 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr5:118682600-118687600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr5:118682600-118688200 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr5:118682600-118689000 Weak transcription Primary hematopoietic stem cells short term culture blood
41 chr5:118682600-118689400 Enhancers Primary T helper naive cells from peripheral blood blood
42 chr5:118682600-118689600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
43 chr5:118682600-118690600 Weak transcription Thymus Thymus
44 chr5:118682600-118693600 Weak transcription Dnd41 blood
45 chr5:118682800-118685600 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr5:118683000-118684600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr5:118683000-118686400 Enhancers Primary B cells from peripheral blood blood
48 chr5:118683000-118688200 Enhancers Primary T helper 17 cells PMA-I stimulated --
49 chr5:118683200-118685200 Enhancers H1 Cell Line embryonic stem cell
50 chr5:118683400-118685400 Enhancers ES-UCSF4 Cell Line embryonic stem cell

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Last update: Aug 31, 2015