The 2.0 version of rSNPBase

Variant report

Variant rs57722161
Chromosome Location chr5:118696495-118696496
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:95 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118690600-118700400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
2 chr5:118691800-118700400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
3 chr5:118692000-118707200 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr5:118692200-118696800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
5 chr5:118692600-118697200 Enhancers Primary hematopoietic stem cells blood
6 chr5:118692800-118702000 Weak transcription Aorta Aorta
7 chr5:118693000-118697000 Enhancers ES-I3 Cell Line embryonic stem cell
8 chr5:118693000-118697800 Enhancers Fetal Heart heart
9 chr5:118693000-118698600 Weak transcription Placenta Amnion Placenta Amnion
10 chr5:118693000-118699800 Enhancers Primary neutrophils fromperipheralblood blood
11 chr5:118693200-118698600 Weak transcription Right Ventricle heart
12 chr5:118693200-118698800 Enhancers Primary T helper cells fromperipheralblood blood
13 chr5:118693400-118696800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
14 chr5:118693400-118696800 Enhancers Primary monocytes fromperipheralblood blood
15 chr5:118693400-118696800 Enhancers Primary mononuclear cells fromperipheralblood Blood
16 chr5:118693400-118697000 Enhancers Small Intestine intestine
17 chr5:118693400-118697600 Enhancers HUES6 Cell Line embryonic stem cell
18 chr5:118693400-118699200 Enhancers Primary T cells fromperipheralblood blood
19 chr5:118693400-118706800 Enhancers Primary T killer memory cells from peripheral blood blood
20 chr5:118693800-118698200 Enhancers Adipose Nuclei Adipose
21 chr5:118693800-118701600 Weak transcription Rectal Smooth Muscle rectum
22 chr5:118694000-118707200 Enhancers Primary T helper naive cells from peripheral blood blood
23 chr5:118694400-118696600 Enhancers Duodenum Mucosa Duodenum
24 chr5:118694400-118700400 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
25 chr5:118694400-118702800 Genic enhancers Primary B cells from peripheral blood blood
26 chr5:118694400-118704600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr5:118694600-118698200 Genic enhancers K562 blood
28 chr5:118694600-118700400 Transcr. at gene 5' and 3' GM12878-XiMat blood
29 chr5:118694800-118696600 Enhancers Fetal Stomach stomach
30 chr5:118694800-118696600 Enhancers Stomach Mucosa stomach
31 chr5:118694800-118696600 Enhancers NHEK skin
32 chr5:118694800-118697200 Enhancers iPS-15b Cell Line embryonic stem cell
33 chr5:118694800-118698000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
34 chr5:118694800-118698400 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr5:118694800-118701200 Weak transcription Fetal Lung lung
36 chr5:118694800-118701600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
37 chr5:118694800-118703800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
38 chr5:118695000-118696600 Weak transcription Pancreas Pancrea
39 chr5:118695000-118696800 Enhancers Duodenum Smooth Muscle Duodenum
40 chr5:118695000-118696800 Weak transcription Left Ventricle heart
41 chr5:118695000-118696800 Weak transcription Lung lung
42 chr5:118695000-118696800 Weak transcription Spleen Spleen
43 chr5:118695000-118698000 Enhancers Monocytes-CD14+_RO01746 blood
44 chr5:118695000-118699400 Weak transcription H9 Cell Line embryonic stem cell
45 chr5:118695000-118699800 Weak transcription ES-WA7 Cell Line embryonic stem cell
46 chr5:118695000-118701600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:118695000-118702000 Weak transcription Colonic Mucosa Colon
48 chr5:118695000-118702400 Enhancers Primary T helper memory cells from peripheral blood 1 blood
49 chr5:118695200-118697400 Weak transcription Fetal Muscle Leg muscle
50 chr5:118695200-118697800 Enhancers Muscle Satellite Cultured Cells --

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Last update: Aug 31, 2015