The 2.0 version of rSNPBase

Variant report

Variant rs72788146
Chromosome Location chr5:118739707-118739708
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:39 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118707600-118754600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr5:118723000-118747600 Weak transcription Pancreas Pancrea
3 chr5:118725400-118741200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
4 chr5:118727000-118740800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
5 chr5:118729600-118747400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr5:118730200-118741000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
7 chr5:118731800-118746600 Weak transcription Primary T cells from cord blood blood
8 chr5:118732200-118745000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
9 chr5:118734000-118747400 Weak transcription Primary hematopoietic stem cells blood
10 chr5:118734200-118741200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr5:118735000-118747000 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr5:118735400-118740600 Weak transcription Duodenum Smooth Muscle Duodenum
13 chr5:118735800-118745200 Weak transcription Fetal Thymus thymus
14 chr5:118735800-118746200 Weak transcription Sigmoid Colon Sigmoid Colon
15 chr5:118736200-118740600 Weak transcription Stomach Mucosa stomach
16 chr5:118736200-118740800 Weak transcription Fetal Heart heart
17 chr5:118736400-118746600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
18 chr5:118736600-118739800 Weak transcription Primary B cells from peripheral blood blood
19 chr5:118736800-118745000 Weak transcription Primary T helper cells PMA-I stimulated --
20 chr5:118736800-118747400 Weak transcription H9 Cell Line embryonic stem cell
21 chr5:118737800-118739800 Enhancers HUES48 Cell Line embryonic stem cell
22 chr5:118737800-118739800 Enhancers iPS-15b Cell Line embryonic stem cell
23 chr5:118738000-118741400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr5:118738600-118741000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
25 chr5:118738600-118745200 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr5:118739000-118739800 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
27 chr5:118739000-118740800 Weak transcription K562 blood
28 chr5:118739000-118741000 Weak transcription H1 Cell Line embryonic stem cell
29 chr5:118739000-118746200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
30 chr5:118739400-118740600 Weak transcription HUES6 Cell Line embryonic stem cell
31 chr5:118739400-118740800 Weak transcription iPS-18 Cell Line embryonic stem cell
32 chr5:118739400-118741600 Enhancers Primary monocytes fromperipheralblood blood
33 chr5:118739400-118742800 Enhancers Primary B cells from cord blood blood
34 chr5:118739600-118739800 Enhancers HUES64 Cell Line embryonic stem cell
35 chr5:118739600-118739800 Enhancers Rectal Mucosa Donor 31 rectum
36 chr5:118739600-118740200 Enhancers GM12878-XiMat blood
37 chr5:118739600-118740200 Flanking Active TSS Monocytes-CD14+_RO01746 blood
38 chr5:118739600-118746800 Weak transcription ES-I3 Cell Line embryonic stem cell
39 chr5:118739600-118747000 Weak transcription iPS-20b Cell Line embryonic stem cell

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Last update: Aug 31, 2015