The 2.0 version of rSNPBase

Variant report

Variant rs6869623
Chromosome Location chr5:118694670-118694671
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:118671200-118695400 Weak transcription A549 lung
2 chr5:118690600-118700400 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
3 chr5:118691800-118695400 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
4 chr5:118691800-118700400 Transcr. at gene 5' and 3' Primary T helper cells PMA-I stimulated --
5 chr5:118692000-118707200 Enhancers Primary T killer naive cells fromperipheralblood blood
6 chr5:118692200-118696800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr5:118692400-118694800 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
8 chr5:118692400-118695000 Flanking Active TSS Primary T helper memory cells from peripheral blood 1 blood
9 chr5:118692400-118695200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
10 chr5:118692400-118696200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
11 chr5:118692600-118695000 Enhancers H9 Cell Line embryonic stem cell
12 chr5:118692600-118695000 Flanking Active TSS Monocytes-CD14+_RO01746 blood
13 chr5:118692600-118695600 Enhancers Primary T cells from cord blood blood
14 chr5:118692600-118696000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
15 chr5:118692600-118697200 Enhancers Primary hematopoietic stem cells blood
16 chr5:118692800-118696000 Weak transcription HSMM muscle
17 chr5:118692800-118702000 Weak transcription Aorta Aorta
18 chr5:118693000-118694800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr5:118693000-118695000 Flanking Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
20 chr5:118693000-118695800 Enhancers Fetal Thymus thymus
21 chr5:118693000-118695800 Weak transcription Hela-S3 cervix
22 chr5:118693000-118696000 Weak transcription Colon Smooth Muscle Colon
23 chr5:118693000-118697000 Enhancers ES-I3 Cell Line embryonic stem cell
24 chr5:118693000-118697800 Enhancers Fetal Heart heart
25 chr5:118693000-118698600 Weak transcription Placenta Amnion Placenta Amnion
26 chr5:118693000-118699800 Enhancers Primary neutrophils fromperipheralblood blood
27 chr5:118693200-118694800 Weak transcription Stomach Mucosa stomach
28 chr5:118693200-118695000 Enhancers iPS-20b Cell Line embryonic stem cell
29 chr5:118693200-118696200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
30 chr5:118693200-118698600 Weak transcription Right Ventricle heart
31 chr5:118693200-118698800 Enhancers Primary T helper cells fromperipheralblood blood
32 chr5:118693400-118694800 Weak transcription NHEK skin
33 chr5:118693400-118695000 Enhancers H1 Cell Line embryonic stem cell
34 chr5:118693400-118695400 Weak transcription Pancreatic Islets Pancreatic Islet
35 chr5:118693400-118695800 Weak transcription NHDF-Ad bronchial
36 chr5:118693400-118695800 Weak transcription Osteobl bone
37 chr5:118693400-118696200 Enhancers Primary T helper naive cells fromperipheralblood blood
38 chr5:118693400-118696200 Weak transcription Placenta Placenta
39 chr5:118693400-118696400 Weak transcription NH-A brain
40 chr5:118693400-118696400 Weak transcription NHLF lung
41 chr5:118693400-118696800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr5:118693400-118696800 Enhancers Primary monocytes fromperipheralblood blood
43 chr5:118693400-118696800 Enhancers Primary mononuclear cells fromperipheralblood Blood
44 chr5:118693400-118697000 Enhancers Small Intestine intestine
45 chr5:118693400-118697600 Enhancers HUES6 Cell Line embryonic stem cell
46 chr5:118693400-118699200 Enhancers Primary T cells fromperipheralblood blood
47 chr5:118693400-118706800 Enhancers Primary T killer memory cells from peripheral blood blood
48 chr5:118693600-118694800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr5:118693600-118695600 Enhancers Thymus Thymus
50 chr5:118693600-118695800 Weak transcription Breast Myoepithelial Primary Cells Breast

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Last update: Aug 31, 2015