Variant report

Variant	rs6895075
Chromosome Location	chr5:145372245-145372246
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs61733334	0.81[AFR][1000 genomes]
rs61734248	0.81[AFR][1000 genomes]
rs6580400	0.90[AFR][1000 genomes]
rs6580401	0.81[AFR][1000 genomes]
rs6859134	0.90[AFR][1000 genomes]
rs6875396	0.97[AFR][1000 genomes]
rs6892368	0.90[AFR][1000 genomes]
rs6896263	0.94[AFR][1000 genomes]

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145362200-145399200	Weak transcription	Placenta Amnion	Placenta Amnion
2	chr5:145362400-145372600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
3	chr5:145362400-145372600	Strong transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:145362600-145404400	Weak transcription	Skeletal Muscle Male	skeletal muscle
5	chr5:145363400-145372600	Weak transcription	Esophagus	oesophagus
6	chr5:145363400-145372800	Weak transcription	Left Ventricle	heart
7	chr5:145364400-145385800	Weak transcription	Pancreas	Pancrea
8	chr5:145366200-145372800	Weak transcription	Fetal Stomach	stomach
9	chr5:145367400-145372600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr5:145368400-145386600	Weak transcription	HepG2	liver
11	chr5:145369400-145393400	Weak transcription	Skeletal Muscle Female	skeletal muscle
12	chr5:145369600-145393400	Weak transcription	NH-A	brain
13	chr5:145370000-145375600	Weak transcription	Liver	Liver
14	chr5:145370000-145392800	Weak transcription	Colonic Mucosa	Colon
15	chr5:145370200-145372600	Weak transcription	Sigmoid Colon	Sigmoid Colon
16	chr5:145370800-145375600	Weak transcription	NHEK	skin
17	chr5:145370800-145386400	Weak transcription	Gastric	stomach
18	chr5:145371000-145372600	Weak transcription	HMEC	breast
19	chr5:145371000-145380800	Weak transcription	Stomach Mucosa	stomach
20	chr5:145371000-145384800	Weak transcription	Osteobl	bone
21	chr5:145371200-145372600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
22	chr5:145371200-145372800	Weak transcription	Breast Myoepithelial Primary Cells	Breast
23	chr5:145371400-145372600	Weak transcription	Rectal Mucosa Donor 29	rectum
24	chr5:145371400-145373600	ZNF genes & repeats	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr5:145371600-145372600	Weak transcription	Duodenum Mucosa	Duodenum
26	chr5:145371800-145372600	Weak transcription	Fetal Intestine Large	intestine
27	chr5:145372000-145372600	Weak transcription	Fetal Intestine Small	intestine
28	chr5:145372000-145380200	Weak transcription	Rectal Mucosa Donor 31	rectum

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