Variant report

Variant	rs6897051
Chromosome Location	chr5:167462765-167462766
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs1432820	0.90[CHB][hapmap];0.93[JPT][hapmap];0.83[YRI][hapmap];0.92[ASN][1000 genomes]
rs17069703	0.80[CHB][hapmap];0.82[ASN][1000 genomes]
rs247992	0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs247993	1.00[CHB][hapmap];1.00[JPT][hapmap];0.86[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs67926229	0.81[ASN][1000 genomes]
rs6896795	1.00[CEU][hapmap];0.95[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.94[MEX][hapmap];0.93[TSI][hapmap];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7714553	0.80[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv517414	chr5:167462765-167465018	Weak transcription Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:10 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:167443800-167466000	Weak transcription	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr5:167447600-167483000	Weak transcription	Right Atrium	heart
3	chr5:167450600-167466600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
4	chr5:167450800-167474000	Weak transcription	Left Ventricle	heart
5	chr5:167454600-167463000	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
6	chr5:167455200-167474600	Weak transcription	NHEK	skin
7	chr5:167457400-167469000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
8	chr5:167457600-167463800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
9	chr5:167457800-167465200	Weak transcription	Right Ventricle	heart
10	chr5:167458200-167474200	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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