Variant report
Variant | rs6906305 |
---|---|
Chromosome Location | chr6:33488032-33488033 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:3)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:3 , 50 per page) page:
1
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10452588 | 1.00[ASN][1000 genomes] |
rs10452603 | 1.00[ASN][1000 genomes] |
rs10452604 | 1.00[ASN][1000 genomes] |
rs55644128 | 1.00[ASN][1000 genomes] |
rs56386969 | 1.00[ASN][1000 genomes] |
rs58032164 | 1.00[ASN][1000 genomes] |
rs58099519 | 1.00[ASN][1000 genomes] |
rs61081787 | 1.00[ASN][1000 genomes] |
rs6457729 | 1.00[ASN][1000 genomes] |
rs6457730 | 1.00[ASN][1000 genomes] |
rs6457731 | 0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes] |
rs6900352 | 1.00[EUR][1000 genomes] |
rs6905849 | 1.00[ASN][1000 genomes] |
rs6906166 | 1.00[ASN][1000 genomes] |
rs6906210 | 1.00[ASN][1000 genomes] |
rs6906395 | 1.00[ASN][1000 genomes] |
rs6906733 | 1.00[ASN][1000 genomes] |
rs6907610 | 1.00[EUR][1000 genomes] |
rs6909362 | 1.00[ASN][1000 genomes] |
rs6924409 | 1.00[ASN][1000 genomes] |
rs6929279 | 1.00[ASN][1000 genomes] |
rs6929336 | 1.00[ASN][1000 genomes] |
rs6929647 | 1.00[ASN][1000 genomes] |
rs6929691 | 1.00[ASN][1000 genomes] |
rs73741934 | 1.00[ASN][1000 genomes] |
rs73743727 | 1.00[ASN][1000 genomes] |
rs73743728 | 1.00[ASN][1000 genomes] |
rs73743729 | 1.00[ASN][1000 genomes] |
rs73743730 | 1.00[ASN][1000 genomes] |
rs7742916 | 1.00[ASN][1000 genomes] |
rs7769296 | 1.00[ASN][1000 genomes] |
rs9461870 | 1.00[ASN][1000 genomes] |
rs9469449 | 1.00[ASN][1000 genomes] |
rs9469450 | 1.00[ASN][1000 genomes] |
rs9469455 | 1.00[ASN][1000 genomes] |
rs9469456 | 1.00[ASN][1000 genomes] |
rs9469457 | 1.00[ASN][1000 genomes] |
rs9469460 | 1.00[ASN][1000 genomes] |
rs9469461 | 1.00[ASN][1000 genomes] |
rs9469462 | 1.00[ASN][1000 genomes] |
rs9469464 | 1.00[ASN][1000 genomes] |
rs9469465 | 1.00[ASN][1000 genomes] |
rs9469466 | 1.00[ASN][1000 genomes] |
rs9469467 | 1.00[ASN][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv830637 | chr6:33329365-33510704 | Flanking Active TSS Weak transcription Strong transcription Active TSS Enhancers Genic enhancers Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 62 gene(s) | inside rSNPs | diseases |
2 | nsv602832 | chr6:33382241-33520221 | Weak transcription Active TSS Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS | TF binding regionCpG islandChromatin interactive regionlncRNAmiRNAmiRNA target site | 41 gene(s) | inside rSNPs | diseases |
3 | nsv524010 | chr6:33468151-33505981 | Flanking Active TSS Bivalent/Poised TSS Weak transcription Flanking Bivalent TSS/Enh Enhancers Active TSS Bivalent Enhancer ZNF genes & repeats Strong transcription Genic enhancers | TF binding regionCpG islandChromatin interactive region | 5 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr6:33481400-33491200 | Weak transcription | Right Atrium | heart |
2 | chr6:33485400-33489200 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr6:33488000-33488200 | Active TSS | Spleen | Spleen |