Variant report

Variant	rs6925640
Chromosome Location	chr6:37399569-37399570
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs11963196	1.00[EUR][1000 genomes]
rs35867476	1.00[EUR][1000 genomes]
rs3897278	1.00[EUR][1000 genomes]
rs57024179	0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs57234413	1.00[EUR][1000 genomes]
rs59082266	1.00[EUR][1000 genomes]
rs61241984	1.00[EUR][1000 genomes]
rs6457987	0.83[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6457988	1.00[EUR][1000 genomes]
rs6905666	0.83[YRI][hapmap];0.86[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs6913348	1.00[EUR][1000 genomes]
rs6925634	0.85[YRI][hapmap];0.89[AFR][1000 genomes];1.00[EUR][1000 genomes]
rs73417847	1.00[EUR][1000 genomes]
rs7744645	1.00[EUR][1000 genomes]
rs7767313	0.83[YRI][hapmap];0.89[AFR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37395200-37400000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr6:37395200-37400000	Weak transcription	HepG2	liver
3	chr6:37396200-37400200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:37398000-37400200	Weak transcription	HSMMtube	muscle
5	chr6:37399000-37400200	Enhancers	K562	blood
6	chr6:37399200-37400000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:37399200-37400000	Weak transcription	NHEK	skin

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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