Variant report

Variant	rs693145
Chromosome Location	chr6:11618766-11618767
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 4 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:3)

rs_ID	r²[population]
rs484782	0.94[EUR][1000 genomes]
rs520928	0.94[EUR][1000 genomes]
rs821437	0.94[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3442943	chr6:11616541-11619014	Enhancers Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11610200-11631400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
2	chr6:11611200-11622600	Weak transcription	Fetal Muscle Leg	muscle
3	chr6:11615600-11621400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr6:11616400-11619600	Weak transcription	Colon Smooth Muscle	Colon
5	chr6:11616600-11622200	Weak transcription	Psoas Muscle	Psoas
6	chr6:11616800-11621200	Weak transcription	Fetal Stomach	stomach
7	chr6:11616800-11622200	Weak transcription	Stomach Smooth Muscle	stomach
8	chr6:11616800-11622400	Weak transcription	Rectal Smooth Muscle	rectum
9	chr6:11616800-11622600	Weak transcription	Fetal Muscle Trunk	muscle
10	chr6:11616800-11622800	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
11	chr6:11616800-11623000	Weak transcription	Lung	lung
12	chr6:11617000-11619600	Weak transcription	Pancreatic Islets	Pancreatic Islet
13	chr6:11617000-11619600	Weak transcription	HSMMtube	muscle
14	chr6:11618000-11618800	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
15	chr6:11618200-11618800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
16	chr6:11618200-11618800	Enhancers	HSMM	muscle
17	chr6:11618200-11619000	Enhancers	NH-A	brain
18	chr6:11618200-11619200	Enhancers	HUVEC	blood vessel
19	chr6:11618200-11619200	Enhancers	NHLF	lung
20	chr6:11618200-11621800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
21	chr6:11618400-11618800	Enhancers	Muscle Satellite Cultured Cells	--
22	chr6:11618400-11618800	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
23	chr6:11618400-11619000	Enhancers	A549	lung
24	chr6:11618600-11622600	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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