Variant report

No.	Distal block	Cell Line	Cell type
1	chr6:11632080..11634746-chr6:11636196..11638611,3	K562	blood:
2	chr6:11636429..11639220-chr6:11640255..11642942,3	MCF-7	breast:
3	chr6:11625969..11627543-chr6:11634747..11636850,2	K562	blood:
4	chr6:11635694..11639373-chr6:11641887..11645289,3	K562	blood:

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1195536	1.00[JPT][hapmap]
rs11961836	0.94[ASN][1000 genomes]
rs484782	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6457867	1.00[JPT][hapmap]
rs6457868	1.00[JPT][hapmap]
rs693145	0.94[EUR][1000 genomes]
rs7739436	1.00[JPT][hapmap]
rs7743280	1.00[JPT][hapmap]
rs7746016	1.00[JPT][hapmap]
rs7746309	1.00[JPT][hapmap]
rs7757263	1.00[JPT][hapmap]
rs7775964	1.00[JPT][hapmap]
rs821437	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9296165	1.00[JPT][hapmap]
rs9296170	1.00[JPT][hapmap]
rs9296171	1.00[JPT][hapmap]
rs9296172	1.00[JPT][hapmap]
rs9470112	1.00[JPT][hapmap]
rs9470132	1.00[JPT][hapmap]
rs9470174	1.00[JPT][hapmap]
rs9470176	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2763532	chr6:11634722-11641048	Enhancers Weak transcription Genic enhancers Strong transcription	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11633200-11640200	Weak transcription	Aorta	Aorta
2	chr6:11633600-11637000	Weak transcription	NH-A	brain
3	chr6:11633600-11637200	Weak transcription	Muscle Satellite Cultured Cells	--
4	chr6:11633600-11637200	Weak transcription	HSMM	muscle
5	chr6:11633600-11637400	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
6	chr6:11633800-11637400	Weak transcription	HSMMtube	muscle
7	chr6:11634800-11637400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr6:11635600-11638000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
9	chr6:11636200-11639200	Enhancers	Pancreas	Pancrea
10	chr6:11636600-11637000	Enhancers	Fetal Lung	lung
11	chr6:11636600-11637200	Enhancers	Ovary	ovary
12	chr6:11636600-11638400	Enhancers	Stomach Mucosa	stomach
13	chr6:11636800-11637200	Enhancers	Gastric	stomach
14	chr6:11636800-11637200	Enhancers	Lung	lung

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