Variant report

Variant	rs484782
Chromosome Location	chr6:11633136-11633137
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:11632264..11635404-chr6:11639257..11642520,3	K562	blood:
2	chr6:11632080..11634746-chr6:11636196..11638611,3	K562	blood:

rs_ID	r²[population]
rs1195536	1.00[JPT][hapmap]
rs11961836	0.89[ASN][1000 genomes]
rs520928	0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6457867	1.00[JPT][hapmap]
rs6457868	1.00[JPT][hapmap]
rs693145	0.94[EUR][1000 genomes]
rs7739436	1.00[JPT][hapmap]
rs7743280	1.00[JPT][hapmap]
rs7746016	1.00[JPT][hapmap]
rs7746309	1.00[JPT][hapmap]
rs7757263	1.00[JPT][hapmap]
rs7775964	1.00[JPT][hapmap]
rs821437	0.84[AFR][1000 genomes];0.84[AMR][1000 genomes];0.88[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9296165	1.00[JPT][hapmap]
rs9296170	1.00[JPT][hapmap]
rs9296171	1.00[JPT][hapmap]
rs9296172	1.00[JPT][hapmap]
rs9470112	1.00[JPT][hapmap]
rs9470132	1.00[JPT][hapmap]
rs9470174	1.00[JPT][hapmap]
rs9470176	1.00[JPT][hapmap]

Chromatin state (count:40 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:11630400-11633400	Enhancers	Lung	lung
2	chr6:11630400-11633600	Enhancers	Muscle Satellite Cultured Cells	--
3	chr6:11630600-11633200	Enhancers	Fetal Lung	lung
4	chr6:11630600-11633600	Enhancers	Fetal Muscle Leg	muscle
5	chr6:11631000-11633800	Enhancers	HSMMtube	muscle
6	chr6:11631200-11633400	Enhancers	Fetal Muscle Trunk	muscle
7	chr6:11631200-11633600	Enhancers	NHLF	lung
8	chr6:11631600-11633200	Weak transcription	Spleen	Spleen
9	chr6:11632000-11633200	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
10	chr6:11632000-11633200	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
11	chr6:11632000-11633600	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
12	chr6:11632000-11633600	Enhancers	A549	lung
13	chr6:11632200-11633400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr6:11632200-11633800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
15	chr6:11632400-11633200	Enhancers	Brain Dorsolateral Prefrontal Cortex	brain
16	chr6:11632400-11633200	Enhancers	Placenta	Placenta
17	chr6:11632400-11633200	Enhancers	Gastric	stomach
18	chr6:11632400-11633400	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
19	chr6:11632400-11633400	Enhancers	Hela-S3	cervix
20	chr6:11632400-11633600	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr6:11632400-11633600	Enhancers	NHEK	skin
22	chr6:11632400-11633800	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr6:11632600-11633200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
24	chr6:11632600-11633200	Enhancers	HUES6 Cell Line	embryonic stem cell
25	chr6:11632600-11633200	Enhancers	Aorta	Aorta
26	chr6:11632600-11633400	Enhancers	Placenta Amnion	Placenta Amnion
27	chr6:11632600-11633600	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
28	chr6:11632600-11633600	Enhancers	Foreskin Fibroblast Primary Cells skin02	Skin
29	chr6:11632600-11633600	Enhancers	NH-A	brain
30	chr6:11632600-11633600	Enhancers	NHDF-Ad	bronchial
31	chr6:11632600-11634400	Enhancers	ES-I3 Cell Line	embryonic stem cell
32	chr6:11632600-11634800	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
33	chr6:11632600-11635800	Enhancers	Pancreas	Pancrea
34	chr6:11632800-11633200	Enhancers	Fetal Intestine Large	intestine
35	chr6:11632800-11633200	Enhancers	Fetal Stomach	stomach
36	chr6:11632800-11634400	Enhancers	Stomach Mucosa	stomach
37	chr6:11633000-11633200	Flanking Active TSS	HSMM	muscle
38	chr6:11633000-11633600	Enhancers	H1 Cell Line	embryonic stem cell
39	chr6:11633000-11633600	Genic enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
40	chr6:11633000-11633600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast

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